Name: Bizionia sediminis P131
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140551

Type strain:

Species: Bizionia sediminis

Strain Designation: P131

Culture col. no.: MCCC 1H00124, KCTC 42587

Strain history: <- Zongjun Du, Shandong Univ..

NCBI tax ID(s): 1737064 (species)

Section

Bizionia sediminis P131 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from a marine sediment sample collected from the coast of Weihai, China.

colony-forming
Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Bizionia*
	Species	**Bizionia sediminis**
	Full Scientific Name (LPSN)	Bizionia sediminis Zhang et al. 2017

Synonym

"Algorimicrobium sediminis"

Information on morphological and physiological properties Morphology

[Ref.: #43295]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #43295]	Cell length	1-2 µm

[Ref.: #43295]	Cell width	0.4-0.6 µm

[Ref.: #43295]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #43295]	Motility	no

[Ref.: #43295]	Colony size	2-4 mm
[Ref.: #43295]	Colony color	Orange
[Ref.: #43295]	Colony shape	circular
[Ref.: #43295]	Incubation period	2 days
[Ref.: #43295]	Cultivation medium used	2216E agar

[Ref.: #43295]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43295]

Culture medium

2216E agar

[Ref.: #43295]

Culture medium growth

		Temperature
[Ref.: #43295]	optimum	28-30 °C
[Ref.: #43295]	growth	4-45 °C
[Ref.: #67771]	growth	28-33 °C

[Ref.: #43295]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43295]			optimum	7-7.5
[Ref.: #43295]			growth	5.5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43295]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #43295]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43295]		NaCl		growth	0-10	%
[Ref.: #43295]		NaCl		optimum	2-3	%

[Ref.: #67771]

Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43295]	acetoacetate ChEBI	+	oxidation
[Ref.: #43295]	agar ChEBI	-	hydrolysis
[Ref.: #43295]	alginate ChEBI	-	hydrolysis
[Ref.: #43295]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #43295]	citrate ChEBI	+	oxidation
[Ref.: #43295]	citrate ChEBI	-	assimilation
[Ref.: #43295]	citrate ChEBI	-	carbon source
[Ref.: #43295]	D-arabitol ChEBI	+	oxidation
[Ref.: #43295]	D-gluconate ChEBI	+	oxidation
[Ref.: #43295]	D-glucose ChEBI	-	assimilation
[Ref.: #43295]	D-glucose 6-phosphate ChEBI	+	oxidation
[Ref.: #43295]	D-mannitol ChEBI	+	oxidation
[Ref.: #43295]	D-mannose ChEBI	+	oxidation
[Ref.: #43295]	D-mannose ChEBI	+	assimilation
[Ref.: #43295]	D-sorbitol ChEBI	+	oxidation
[Ref.: #43295]	gelatin ChEBI	+	hydrolysis
[Ref.: #43295]	glycine-proline ChEBI	+	oxidation
[Ref.: #43295]	glycyl-l-glutamate ChEBI	+	oxidation
[Ref.: #43295]	hydrogen sulfide ChEBI	-	assimilation
[Ref.: #43295]	indole ChEBI	-	assimilation
[Ref.: #43295]	L-arginine ChEBI	+	oxidation
[Ref.: #43295]	L-aspartate ChEBI	+	oxidation
[Ref.: #43295]	L-histidine ChEBI	-	assimilation
[Ref.: #43295]	L-serine ChEBI	+	oxidation
[Ref.: #43295]	lactate ChEBI	+	oxidation
[Ref.: #43295]	maltose ChEBI	-	assimilation
[Ref.: #43295]	nitrate ChEBI	-	reduction
[Ref.: #43295]	O-nitrophenyl-beta-D-galactopyranosid	-	assimilation
[Ref.: #43295]	stachyose ChEBI	+	oxidation
[Ref.: #43295]	starch ChEBI	-	hydrolysis
[Ref.: #43295]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43295]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43295]	tween 60 ChEBI	+	hydrolysis
[Ref.: #43295]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43295]	acetylspiramycin ChEBI	yes	30	µg (disc)
[Ref.: #43295]	ampicillin ChEBI	yes	10	µg (disc)
[Ref.: #43295]	cefotaxime sodium ChEBI	yes	30	µg (disc)
[Ref.: #43295]	chloramphenicol ChEBI	yes	30	µg (disc)
[Ref.: #43295]	clindamycin ChEBI	yes	30	µg (disc)
[Ref.: #43295]	erythromycin ChEBI	yes	15	µg (disc)
[Ref.: #43295]	gentamicin ChEBI				yes	10	µg (disc)
[Ref.: #43295]	kanamycin ChEBI				yes	30	µg (disc)
[Ref.: #43295]	nalidixic acid ChEBI				yes	30	µg (disc)
[Ref.: #43295]	neomycin ChEBI				yes	30	µg (disc)
[Ref.: #43295]	norfloxacin ChEBI				yes	10	µg (disc)
[Ref.: #43295]	ofloxacin ChEBI				yes	5	µg (disc)
[Ref.: #43295]	penicillin g ChEBI	yes	10	µg (disc)
[Ref.: #43295]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #43295]	streptomycin ChEBI				yes	10	µg (disc)
[Ref.: #43295]	sulfamethoxydiazine ChEBI				yes	10	µg (disc)
[Ref.: #43295]	tetracycline ChEBI				yes	30	µg (disc)
[Ref.: #43295]	tobramycin ChEBI				yes	10	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43295]	6-phospho-beta-galactosidase	-	3.2.1.85
[Ref.: #43295]	acid phosphatase	+	3.1.3.2
[Ref.: #43295]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43295]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43295]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43295]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43295]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43295]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43295]	beta-D-fucosidase	-	3.2.1.38
[Ref.: #43295]	beta-glucosidase	-	3.2.1.21
[Ref.: #43295]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43295]	catalase	+	1.11.1.6
[Ref.: #43295]	cystine arylamidase	-	3.4.11.3
[Ref.: #43295]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43295]	esterase (C 4)	-
[Ref.: #43295]	esterase Lipase (C 8)	+
[Ref.: #43295]	leucine arylamidase	+	3.4.11.1
[Ref.: #43295]	lipase (C 14)	-
[Ref.: #43295]	lysine decarboxylase	-	4.1.1.18
[Ref.: #43295]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43295]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43295]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #43295]	trypsin	-	3.4.21.4
[Ref.: #43295]	tryptophan deaminase	-	4.1.99.1
[Ref.: #43295]	urease	-	3.5.1.5
[Ref.: #43295]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43295]	Sample type/isolated from	a marine sediment sample collected from the coast of Weihai, China
[Ref.: #43295]	Geographic location (country and/or sea, region)	Weihai, China
[Ref.: #43295]	Country	China
[Ref.: #43295]	Country ISO 3 Code	CHN
[Ref.: #43295]	Continent	Asia
[Ref.: #43295]	Geographic location	36.0000°/122.0000°

[Ref.: #67771]	Sample type/isolated from	From marine sediment of the coast of Weihai
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43295]	16s rRNA	KR528476		GenBank

[Ref.: #43295]	GC-content	36.7 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	36.7 mol%

Availability in culture collections External links

[Ref.: #43295]

Culture collection no.

MCCC 1H00124, KCTC 42587

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bizionia sediminis sp. nov., isolated from coastal sediment.	Zhang H, Shi MJ, Xia HF, Chen GJ, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001936	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43295

Hui Zhang, Ming-Jing Shi, Hai-Feng Xia, Guan-Jun Chen, Zong-Jun Du: Bizionia sediminis sp. Nov., isolated from coastal sediment. IJSEM 67: 2263 - 2267 2017 ( DOI 10.1099/ijsem.0.001936 , PubMed 28691658 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

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