Name: Bradyrhizobium cajani AMBPC1011
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140541

Type strain:

Species: Bradyrhizobium cajani

Strain Designation: AMBPC1011

Culture col. no.: CECT 9227, LMG 29967

NCBI tax ID(s): 1928661 (species)

Section

Bradyrhizobium cajani AMBPC1011 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from effective root nodules of plants from C. cajan cultivated at Monte Monito in Azúa, Dominican Republic.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Nitrobacteraceae*
	Genus	*Bradyrhizobium*
	Species	**Bradyrhizobium cajani**
	Full Scientific Name (LPSN)	Bradyrhizobium cajani Araújo et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43328]	Gram stain	negative

[Ref.: #43328]	Cell shape	rod-shaped

[Ref.: #43328]	Colony color	pearl-white
[Ref.: #43328]	Cultivation medium used	YMA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43328]

Culture medium

YMA

[Ref.: #43328]

Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #43328]			growth	15-37 °C
[Ref.: #43328]			optimum	28 °C

[Ref.: #43328]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #43328]			optimum	7-7.5
[Ref.: #43328]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43328]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43328]		NaCl	no	growth	1	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43328]	(R)-lactate ChEBI	+/-	builds acid from
[Ref.: #43328]	(S)-lactate ChEBI	+/-	builds acid from
[Ref.: #43328]	2-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #43328]	3-hydroxybenzoate ChEBI	-	builds acid from
[Ref.: #43328]	3-hydroxybutyrate ChEBI	-	builds acid from
[Ref.: #43328]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #43328]	adipate ChEBI	+	builds acid from
[Ref.: #43328]	citrate ChEBI	+	builds acid from
[Ref.: #43328]	citrate ChEBI	+/-	builds acid from
[Ref.: #43328]	D-ribose ChEBI	+	builds acid from
[Ref.: #43328]	decanoate ChEBI	-	builds acid from
[Ref.: #43328]	esculin ChEBI	+	hydrolysis
[Ref.: #43328]	gluconate ChEBI	-	builds acid from
[Ref.: #43328]	glucose ChEBI	-	fermentation
[Ref.: #43328]	glucose ChEBI	+	builds acid from
[Ref.: #43328]	glycogen ChEBI	+	builds acid from
[Ref.: #43328]	indole-3-acetic acid ChEBI	-	builds acid from
[Ref.: #43328]	itaconate ChEBI	-	builds acid from
[Ref.: #43328]	L-alanine 4-nitroanilide	-	builds acid from
[Ref.: #43328]	L-arabinose ChEBI	-	builds acid from
[Ref.: #43328]	L-fucose ChEBI	+	builds acid from
[Ref.: #43328]	L-histidine ChEBI	+/-	builds acid from
[Ref.: #43328]	L-proline ChEBI	+	builds acid from
[Ref.: #43328]	L-rhamnose ChEBI	+	builds acid from
[Ref.: #43328]	L-serine ChEBI	-	builds acid from
[Ref.: #43328]	L-sorbose ChEBI	-	builds acid from
[Ref.: #43328]	malate ChEBI	+	builds acid from
[Ref.: #43328]	maltose ChEBI	+/-	builds acid from
[Ref.: #43328]	mannitol ChEBI	+	builds acid from
[Ref.: #43328]	mannose ChEBI	+	builds acid from
[Ref.: #43328]	melibiose ChEBI	-	builds acid from
[Ref.: #43328]	myo-inositol ChEBI	-	builds acid from
[Ref.: #43328]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #43328]	nitrate ChEBI	+	reduction
[Ref.: #43328]	phenylacetate ChEBI	+	builds acid from
[Ref.: #43328]	propionate ChEBI	-	builds acid from
[Ref.: #43328]	salicin ChEBI	-	builds acid from
[Ref.: #43328]	sodium malonate ChEBI	-	builds acid from
[Ref.: #43328]	suberic acid ChEBI	+	builds acid from
[Ref.: #43328]	sucrose ChEBI	-	builds acid from
[Ref.: #43328]	urea ChEBI	+	hydrolysis
[Ref.: #43328]	valerate ChEBI	+/-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43328]	ampicillin ChEBI				yes	2	µg (disc)
[Ref.: #43328]	cefuroxime ChEBI				yes	30	µg (disc)
[Ref.: #43328]	cloxacillin ChEBI				yes	1	µg (disc)
[Ref.: #43328]	erythromycin ChEBI				yes	2	µg (disc)
[Ref.: #43328]	gentamicin ChEBI	yes	10	µg (disc)
[Ref.: #43328]	neomycin ChEBI	yes	5	µg (disc)
[Ref.: #43328]	penicillin ChEBI				yes	10	Unit (disc)
[Ref.: #43328]	polymyxin b ChEBI				yes	300	Unit (disc)
[Ref.: #43328]	tetracycline ChEBI	yes	30	µg (disc)

	Metabolite production	Metabolite	Production
[Ref.: #43328]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43328]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43328]	beta-galactosidase	+/-	3.2.1.23
[Ref.: #43328]	gelatinase	-

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43328]

Fatty acid	Percentage
C18:1ω7c / C18:1ω6c	83.4
C16:0	11.4
C18:0	2
C16:1ω5c	1.3
C18:1ω5c	1
C18:1ω7c 11-methyl	0.6
C16:1ω7c / C16:1ω6c	0.4

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43328]	Sample type/isolated from	effective root nodules of plants from C. cajan cultivated at Monte Monito in Azúa, Dominican Republic
[Ref.: #43328]	Geographic location (country and/or sea, region)	Monte Monito, Azúa
[Ref.: #43328]	Country	Dominican Republic
[Ref.: #43328]	Country ISO 3 Code	DOM
[Ref.: #43328]	Continent	Middle and South America
[Ref.: #43328]	Enrichment culture	YMA agar
* marker position based on {}

Isolation sources categories

#Host	#Plants	-
#Host Body-Site	#Plant	#Root nodule

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KY349447 (>99% sequence identity) for Bradyrhizobium from Microbeatlas

Aquatic Samples	688
Soil Samples	1424
Animal Samples	2839
Plant Samples	203
Total Samples	5154

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43328]	16S rRNA	KY349447		GenBank

[Ref.: #43328]

GC-content

62.7 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #43328]

Culture collection no.

CECT 9227, LMG 29967

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bradyrhizobium cajani sp. nov. isolated from nodules of Cajanus cajan.	Araujo J, Flores-Felix JD, Igual JM, Peix A, Gonzalez-Andres F, Diaz-Alcantara CA, Velazquez E	Int J Syst Evol Microbiol	10.1099/ijsem.0.001932	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43328

Juan Araújo, José David Flores-Félix, José M. Igual, Alvaro Peix, Fernando González-Andrés, César Antonio Díaz-Alcántara, Encarna Velázquez: Bradyrhizobium cajani sp. nov. isolated from nodules of Cajanus cajan. IJSEM 67: 2236 - 2241 2017 ( DOI 10.1099/ijsem.0.001932 , PubMed 28671523 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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