Name: Acinetobacter colistiniresistens CCM 8641
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140537

Type strain:

Species: Acinetobacter colistiniresistens

Culture col. no.: CCM 8641, CIP 110478, CCUG 67966, CNCTC 7573, DSM 107593, NIPH 2036

Strain history: CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France, Genomic sp. 13BJ/14TU: strain NIPH 2036 <- P. Bouvet 1191 <- P. Osterreich 190

NCBI tax ID(s): 280145 (species)

SI-ID 399463

DSM 107593, CCUG 67966, CIP 110478

Other strains from Acinetobacter colistiniresistens

A. colistiniresistens CIP 110477, NIPH 1859, LMG 10627, ...
A. colistiniresistens CCUG 887, ATCC 17905, NCTC 10304, ...

Section

Acinetobacter colistiniresistens CCM 8641 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from catheter in Belgium prior 1990.

coccus-shaped
colony-forming
Gram-negative
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter colistiniresistens**
	Full Scientific Name (LPSN)	Acinetobacter colistiniresistens Nemec et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43320]	Gram stain	negative
[Ref.: #118703]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.979

[Ref.: #43320]	Cell shape	coccus-shaped
[Ref.: #118703]	Cell shape	rod-shaped

[Ref.: #43320]	Motility	no
[Ref.: #118703]	Motility	no

[Ref.: #43320]	Type of hemolysis	beta
[Ref.: #43320]	Hemolysis ability	1
[Ref.: #43320]	Colony size	1-2 mm
[Ref.: #43320]	Colony color	grey-white
[Ref.: #43320]	Colony shape	circular
[Ref.: #43320]	Incubation period	1 day
[Ref.: #43320]	Cultivation medium used	Tryptic soy agar

[Ref.: #63449]	Incubation period	1 day

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64859]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #64859]

Culture medium growth

[Ref.: #64859]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #43320]

Culture medium

Tryptic soy agar

[Ref.: #43320]

Culture medium growth

[Ref.: #43320]

Culture medium

Brain heart infusion broth

[Ref.: #43320]

Culture medium growth

[Ref.: #64859]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #64859]

Culture medium growth

[Ref.: #64859]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64859]

Culture medium composition

expand / minimize

[Ref.: #118703]

Culture medium

CIP Medium 72

[Ref.: #118703]

Culture medium growth

[Ref.: #118703]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #43320]		growth	37 °C
[Ref.: #43320]	no	growth	41 °C
[Ref.: #43320]		growth	15-35 °C
[Ref.: #63449]		growth	30 °C
[Ref.: #64859]		growth	30 °C

[Ref.: #43320]	Temperature range	mesophilic
[Ref.: #43320]	Temperature range	thermophilic
[Ref.: #63449]	Temperature range	mesophilic
[Ref.: #64859]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43320]	Oxygen tolerance	aerobe
[Ref.: #63449]	Oxygen tolerance	aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.998

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43320]	2,3-butanediol ChEBI	-	growth
[Ref.: #43320]	4-hydroxybenzoate ChEBI	+	growth
[Ref.: #43320]	4-oxopentanoate ChEBI	-	growth
[Ref.: #43320]	acetate ChEBI	+	carbon source
[Ref.: #43320]	adipate ChEBI	-	growth
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #43320]	ammonium ChEBI	+	nitrogen source
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #43320]	azelaate ChEBI	-	growth
[Ref.: #43320]	benzoate ChEBI	-	growth
[Ref.: #43320]	beta-alanine ChEBI	-	growth
[Ref.: #43320]	citraconate ChEBI	-	growth
[Ref.: #43320]	citrate ChEBI	+	carbon source
[Ref.: #43320]	D-gluconate ChEBI	-	growth
[Ref.: #43320]	D-glucose ChEBI	+	builds acid from
[Ref.: #43320]	D-glucose ChEBI	-	growth
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #43320]	D-malate ChEBI	+	growth
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #43320]	D-ribose ChEBI	-	growth
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #43320]	ethanol ChEBI	-	growth
[Ref.: #43320]	gamma-aminobutyric acid ChEBI	-	growth
[Ref.: #43320]	gelatin ChEBI	+	hydrolysis
[Ref.: #68369]	gelatin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #43320]	gentisate ChEBI	+	growth
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #43320]	glutarate ChEBI	-	growth
[Ref.: #43320]	histamine ChEBI	-	growth
[Ref.: #43320]	L-arabinose ChEBI	-	growth
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #43320]	L-arginine ChEBI	+	carbon source
[Ref.: #43320]	L-aspartate ChEBI	-	growth
[Ref.: #43320]	L-glutamate ChEBI	+	carbon source
[Ref.: #43320]	L-histidine ChEBI	+	carbon source
[Ref.: #43320]	L-leucine ChEBI	-	growth
[Ref.: #43320]	L-ornithine ChEBI	+/-	growth
[Ref.: #43320]	L-phenylalanine ChEBI	+	growth
[Ref.: #43320]	L-tartrate ChEBI	-	growth
[Ref.: #43320]	lactate ChEBI	+	growth
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #43320]	malonate ChEBI	-	growth
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #43320]	phenylacetate ChEBI	+	growth
[Ref.: #43320]	putrescine ChEBI	-	growth
[Ref.: #43320]	trans-aconitate ChEBI	-	growth
[Ref.: #43320]	tricarballylate ChEBI	-	growth
[Ref.: #43320]	trigonelline ChEBI	-	growth
[Ref.: #43320]	tryptamine ChEBI	-	growth
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #43320]	catalase	+	1.11.1.6
[Ref.: #43320]	cytochrome oxidase	-	1.9.3.1
[Ref.: #68369]	cytochrome oxidase	-	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	+		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #64859]	25309	-	-	+/-	-	-	-	+	-	-	-	-	-	-	-	-	+	-	+	+	+	-
[Ref.: #64859]	24748	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	+	-	+	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43320]	Sample type/isolated from	catheter in Belgium prior 1990
[Ref.: #43320]	Country	Belgium
[Ref.: #43320]	Country ISO 3 Code	BEL
[Ref.: #43320]	Continent	Europe

[Ref.: #63449]	Sample type/isolated from	Human catheter
[Ref.: #63449]	Sampling date	1990
[Ref.: #63449]	Country	Belgium
[Ref.: #63449]	Country ISO 3 Code	BEL
[Ref.: #63449]	Continent	Europe

[Ref.: #64859]	Sample type/isolated from	catheter, human
[Ref.: #64859]	Country	Belgium
[Ref.: #64859]	Country ISO 3 Code	BEL
[Ref.: #64859]	Continent	Europe

[Ref.: #118703]	Sample type/isolated from	Human, Catheter
[Ref.: #118703]	Country	Belgium
[Ref.: #118703]	Country ISO 3 Code	BEL
[Ref.: #118703]	Continent	Europe
[Ref.: #118703]	Isolation date	1990
* marker position based on {}

Isolation sources categories

#Infection

#Medical device

#Catheter

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #118703]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43320]	variants of 16S rRNA gene (locus_tag='F907_03155')	ATGK01000018.1		GenBank

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acinetobacter colistiniresistens NIPH 2036	GCA_000413935	scaffold	GenBank	280145 tax ID	*
[Ref.: #66792]	Acinetobacter sp. NIPH 2036	1217696.3	wgs	PATRIC	280145 tax ID	*
[Ref.: #66792]	Acinetobacter colistiniresistens NIPH 2036	2565956665	draft	JGI IMG/M	280145 tax ID	*

[Ref.: #43320]	GC-content	41.3 mol%
[Ref.: #64859]	GC-content	41.3 mol%	sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acinetobacter colistiniresistens NIPH 2036 NCBI: GCA_000413935.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter colistiniresistens NIPH 2036 NCBI: GCA_000413935.1
[Ref.: #69480]	motile	no	91.992	yes
[Ref.: #69480]	flagellated	no	93.812	yes
[Ref.: #69480]	gram-positive	no	97.454	no
[Ref.: #69480]	anaerobic	no	98.616	yes
[Ref.: #69480]	aerobic	yes	94.457	yes
[Ref.: #69480]	halophile	no	87.515	no
[Ref.: #69480]	spore-forming	no	96.33	no
[Ref.: #69480]	thermophile	no	99.91	no
[Ref.: #69480]	glucose-util	no	86.051	yes
[Ref.: #69480]	glucose-ferment	no	89.487	no

Availability in culture collections External links

[Ref.: #64859]

Culture collection no.

CCM 8641, CIP 110478, CCUG 67966, CNCTC 7573, DSM 107593, NIPH 2036

[Ref.: #96738]

SI-ID 399463

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acinetobacter colistiniresistens sp. nov. (formerly genomic species 13 sensu Bouvet and Jeanjean and genomic species 14 sensu Tjernberg and Ursing), isolated from human infections and characterized by intrinsic resistance to polymyxins.	Nemec A, Radolfova-Krizova L, Maixnerova M, Sedo O	Int J Syst Evol Microbiol	10.1099/ijsem.0.001903	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43320

Alexandr Nemec, Lenka Radolfova-Krizova, Martina Maixnerova, Ondrej Sedo: Acinetobacter colistiniresistens sp. nov. (formerly genomic species 13 sensu Bouvet and Jeanjean and genomic species 14 sensu Tjernberg and Ursing), isolated from human infections and characterized by intrinsic resistance to polymyxins. IJSEM 67: 2134 - 2141 2017 ( DOI 10.1099/ijsem.0.001903 , PubMed 28671519 )

#63449 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 67966

#64859

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107593

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96738

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399463.1 )

#118703 Collection of Institut Pasteur ; Curators of the CIP; CIP 110478
* These data were automatically processed and therefore are not curated

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Acinetobacter colistiniresistens NIPH 2036

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