Ehrlichia muris (CSUR E2, CRIRC EMU001, AS 145)

Name: Ehrlichia muris (CSUR E2, CRIRC EMU001, AS 145)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140535

Type strain

Culture col. no. CSUR E2 CRIRC EMU001 AS 145

NCBI tax ID(s) 35795 2020670

Special Collections Literature strains

Ehrlichia muris CSUR E2 is a Gram-negative, coccus-shaped bacterium of the family Ehrlichiaceae.

Gram-negative coccus-shaped genome sequence 16S sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

CSUR E2 CRIRC EMU001 AS 145

@ref 20215

Last LPSN update 2026-05-29 08:39:44

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rickettsiales

Family Ehrlichiaceae

Genus Ehrlichia

Species Ehrlichia muris

Full scientific name Ehrlichia muris Wen et al. 1995

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
43319	negative	coccus-shaped
125439	negative			99.816

Culture and growth conditions

Culture medium

@ref	Name	Growth
43319	DH82 canine macrophage-like cells

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	97.253

Spore formation

@ref	Spore formation	Confidence
125438		95
125439		99.989

Observation

43319

Observationnot cultivatable in cell-free media

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM50822v1 assembly for Ehrlichia muris AS145	complete	GCA_000508225	1423892.3	2558309078	1423892	97.48

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Ehrlichia muris 16S ribosomal RNA gene, partial sequence.	U15527	1428		1423892

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM50822v1 assembly for Ehrlichia muris AS145
BV-BRC: 1423892.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	97.25	no
125439	gram_stain	BacteriaNetⓘ	negative	99.82	no
125439	motility	BacteriaNetⓘ	yes	48.93	no
125439	spore_formation	BacteriaNetⓘ	no	99.99	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Ehrlichia muris AS145 AS145
NCBI: GCA_000508225.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	84.23	no
125438	anaerobic	anaerobicⓘ	no	81.18	no
125438	aerobic	aerobicⓘ	no	61.42	no
125438	spore-forming	spore-formingⓘ	no	95.00	no
125438	thermophilic	thermophileⓘ	no	87.08	no
125438	flagellated	motile2+ⓘ	no	87.82	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete Genome Sequence of Ehrlichia muris Strain AS145T, a Model Monocytotropic Ehrlichia Strain.	Thirumalapura NR, Qin X, Kuriakose JA, Walker DH	Genome Announc	10.1128/genomeA.01234-13	2014
Phylogeny	Proposal to reclassify Ehrlichia muris as Ehrlichia muris subsp. muris subsp. nov. and description of Ehrlichia muris subsp. eauclairensis subsp. nov., a newly recognized tick-borne pathogen of humans.	Pritt BS, Allerdice MEJ, Sloan LM, Paddock CD, Munderloh UG, Rikihisa Y, Tajima T, Paskewitz SM, Neitzel DF, Hoang Johnson DK, Schiffman E, Davis JP, Goldsmith CS, Nelson CM, Karpathy SE	Int J Syst Evol Microbiol	10.1099/ijsem.0.001896	2017
Phylogeny	Ehrlichia muris sp. nov., identified on the basis of 16S rRNA base sequences and serological, morphological, and biological characteristics.	Wen B, Rikihisa Y, Mott J, Fuerst PA, Kawahara M, Suto C	Int J Syst Bacteriol	10.1099/00207713-45-2-250	1995

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43319	Bobbi S. Pritt, Michelle E. J. Allerdice, Lynne M. Sloan, Christopher D. Paddock, Ulrike G. Munderloh, Yasuko Rikihisa, Tomoko Tajima, Susan M. Paskewitz, David F. Neitzel, Diep K. Hoang Johnson, Elizabeth Schiffman, Jeffrey P. Davis, Cynthia S. Goldsmith, Curtis M. Nelson, Sandor E. Karpathy: Proposal to reclassify Ehrlichia muris as Ehrlichia muris subsp. muris subsp. nov. and description of Ehrlichia muris subsp. eauclairensis subsp. nov., a newly recognized tick-borne pathogen of humans. IJSEM 67: 2121 - 2126 2017 ( DOI 10.1099/ijsem.0.001896 , PubMed 28699575 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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Ehrlichia muris (CSUR E2, CRIRC EMU001, AS 145)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000508225

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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