Flavobacterium fulvum (KACC 18666, NBRC 111764, UCM-R15)

Name: Flavobacterium fulvum (KACC 18666, NBRC 111764, UCM-R15)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140517

Type strain

Strain Designation UCM-R15

Culture col. no. KACC 18666 NBRC 111764 UCM-R15

NCBI tax ID(s) 1778662

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Flavobacterium fulvum UCM-R15 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from soil samples.

Gram-negative rod-shaped colony-forming aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 391088

NBRC 111764

@ref 20215

Last LPSN update 2026-05-29 08:39:44

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flavobacterium

Species Flavobacterium fulvum

Full scientific name Flavobacterium fulvum Nguyen and Kim 2016

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
43098	negative	0.7-1.0 µm	0.15-0.2 µm	rod-shaped

Colony morphology

@ref	Colony color	Colony shape	Medium used
43098	deep yellow	circular	R2A

Pigmentation

@ref	Production	Name
43098		flexirubin type pigments

Culture and growth conditions

Culture medium

@ref	Name	Growth
43098	Reasoner's 2A agar (R2A)
43098	nutritient agar (NA)
43098	LB (Luria-Bertani) MEDIUM
43098	MacConkey agar
43098	trypticase soy agar (TSA)

Culture temp

@ref	Growth	Type	Temperature (°C)
43098	positive	growth	15-35

Culture pH

@ref	Ability	Type	PH	PH range
43098	positive	growth	5.5-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

43098

Oxygen toleranceaerobe

Spore formation

43098

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43098	NaCl	positive	growth	0-0.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43098	355715 ChEBI	4-nitrophenyl beta-D-galactopyranoside	-	assimilation
43098	17128 ChEBI	adipate	-	assimilation
43098	17634 ChEBI	D-glucose	-	assimilation
43098	16899 ChEBI	D-mannitol	-	assimilation
43098	16024 ChEBI	D-mannose	-	assimilation
43098	27689 ChEBI	decanoate	-	assimilation
43098	16991 ChEBI	dna	-	hydrolysis
43098		esculin ferric citrate	+	assimilation
43098	5291 ChEBI	gelatin	+	assimilation
43098	17234 ChEBI	glucose	-	builds acid from
43098	30849 ChEBI	L-arabinose	-	assimilation
43098	16467 ChEBI	L-arginine	-	assimilation
43098	16828 ChEBI	L-tryptophan	-	assimilation
43098	25115 ChEBI	malate	-	assimilation
43098	17306 ChEBI	maltose	-	assimilation
43098		milk	+	hydrolysis
43098	506227 ChEBI	N-acetylglucosamine	-	assimilation
43098	17632 ChEBI	nitrate	-	reduction
43098	18401 ChEBI	phenylacetate	-	assimilation
43098	32032 ChEBI	potassium gluconate	-	assimilation
43098	53258 ChEBI	sodium citrate	-	assimilation
43098	28017 ChEBI	starch	-	hydrolysis
43098	16199 ChEBI	urea	-	hydrolysis
43098	16199 ChEBI	urea	-	assimilation

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43098	16136 ChEBI	hydrogen sulfide
43098	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43098	acid phosphatase	+	3.1.3.2
43098	alkaline phosphatase	+	3.1.3.1
43098	alpha-chymotrypsin	-	3.4.21.1
43098	alpha-fucosidase	-	3.2.1.51
43098	alpha-galactosidase	-	3.2.1.22
43098	alpha-glucosidase	-	3.2.1.20
43098	alpha-mannosidase	-	3.2.1.24
43098	beta-galactosidase	-	3.2.1.23
43098	beta-glucosidase	-	3.2.1.21
43098	beta-glucuronidase	-	3.2.1.31
43098	catalase	+	1.11.1.6
43098	cystine arylamidase	+	3.4.11.3
43098	cytochrome oxidase	+	1.9.3.1
43098	esterase (C 4)	+
43098	esterase Lipase (C 8)	+
43098	leucine arylamidase	+	3.4.11.1
43098	lipase (C 14)	-
43098	N-acetyl-beta-glucosaminidase	-	3.2.1.52
43098	naphthol-AS-BI-phosphohydrolase	+
43098	trypsin	-	3.4.21.4
43098	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

43098

Fatty acid	Percentage
C15:0 iso	33.6
iso-C17:1ω7c / C16:0 10-methyl	18.4
C17:0 iso 3OH	11.2
C15:1 iso G	10.9
C15:0 iso 3OH	8
C16:0 iso	2.7
C16:1ω7c / C16:1ω6c	1.7
C15:0 anteiso	1.5
C15:0 3OH	1.4
C16:0	1.1
C13:0 iso	1.1
C16:1 iso H	1.1
C15:1ω6c	0.9
C16:0 iso 3OH	0.8
C14:0 iso	0.8
C15:0 2OH	0.8
C16:0 3OH	0.6
C14:0	0.5
C17:0 3OH	0.5
C17:1ω8c	0.4
C15:1 anteiso A	0.4
C17:1ω6c	0.3
C17:0 2OH	0.3
C14:0 iso 3OH	0.3
C17:0 iso	0.2
C18:1ω5c	0.2
C13:0	0.2

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture duration	Enrichment culture temperature
43098	soil samples	Yuseong-gu, Daejeon	Republic of Korea	KOR	Asia	36	127 36/127	VL55 medium	4 weeks	25

Taxonmaps

69479

Global distribution of 16S sequence KU052686 (>99% sequence identity) for Flavobacterium fulvum subclade from Microbeatlas

Aquatic Samples	6
Soil Samples	4
Animal Samples	0
Plant Samples	0
Total Samples	10

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
43098	Flavobacterium fulvum strain UCM-R15 16S ribosomal RNA gene, partial sequence	KU052686	1454		1778662

GC content

@ref	GC-content (mol%)	Method
43098	35.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium flaviflagrans sp. nov., a bacterium of the family Flavobacteriaceae isolated from forest soil.	Dahal RH, Chaudhary DK, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.002000	2017
Phylogeny	Flavobacterium fulvum sp. nov., Flavobacterium pedocola sp. nov. and Flavobacterium humicola sp. nov., three new members of the family Flavobacteriaceae, isolated from soil.	Nguyen TM, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001154	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43098	Tuan Manh Nguyen, Jaisoo Kim: Flavobacterium fulvum sp. nov., Flavobacterium pedocola sp. nov. and Flavobacterium humicola sp. nov., three new members of the family Flavobacteriaceae, isolated from soil. IJSEM 66: 3108 - 3118 2016 ( DOI 10.1099/ijsem.0.001154 , PubMed 27188996 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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About us

Flavobacterium fulvum (KACC 18666, NBRC 111764, UCM-R15)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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