Streptomyces adustus (NBRC 109810, KACC 17197, WH-9)

Name: Streptomyces adustus (NBRC 109810, KACC 17197, WH-9)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140494

Type strain

Strain Designation WH-9, IMER00657

Culture col. no. NBRC 109810 KACC 17197 WH-9 DSM 111621 IMER00657

NCBI tax ID(s) 1609272

Special Collections DSMZ Literature strains

Links

Streptomyces adustus WH-9 is an aerobe, spore-forming, Gram-positive bacterium that builds a substrate mycelium and was isolated from bamboo humus.

spore-forming Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401329

NBRC 109810,DSM 111621

@ref 20215

Last LPSN update 2026-02-09 11:33:38

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces adustus

Full scientific name Streptomyces adustus Lee and Whang 2016

Morphology

Cell morphology

@ref	Gram stain	Confidence
43108	positive
125439	positive	99.8
125439		90.5

Multicellular morphology

@ref	Forms multicellular complex	Complex name	Further description
43108		substrate mycelium	extensively branched
43108		aerial hyphae	differentiate into straight to Spirales chains of rough-surfaced spores

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
43108	ISP 2
43108	ISP 3
43108	ISP 4
43108	ISP 5
43108	ISP 6
43108	ISP 7
67669	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
67669	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water
67669	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
43108	positive	optimum	28
43108	positive	growth	10-37
67669	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
43108	positive	optimum	6.0-8.0
43108	positive	growth	4.0-11.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
43108	aerobe
125439	obligate aerobe	98.2

Spore formation

@ref	Spore formation	Confidence
43108
125438		90.725

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43108	NaCl	positive	growth	0-4 %(w/v)
43108	NaCl		growth	5 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43108	15903 ChEBI	beta-d-glucose	+	carbon source
43108		casein	+	hydrolysis
43108	62968 ChEBI	cellulose	+	hydrolysis
43108	15824 ChEBI	D-fructose	+	carbon source
43108	16899 ChEBI	D-mannitol	+	carbon source
43108	65327 ChEBI	D-xylose	+	carbon source
43108	5291 ChEBI	gelatin	+	hydrolysis
43108	30849 ChEBI	L-arabinose	+	carbon source
43108	62345 ChEBI	L-rhamnose	+	carbon source
43108	17632 ChEBI	nitrate	+	reduction
43108	16634 ChEBI	raffinose	+	carbon source
43108	28017 ChEBI	starch	-	hydrolysis
43108	17992 ChEBI	sucrose	+	carbon source
43108	16199 ChEBI	urea	-	hydrolysis

Fatty acid profile

Metadata FA analysis

@ref

43108

Fatty acid	Percentage
C15:0 anteiso	31.32
C16:0 iso	12.33
C15:0 iso	11.37

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture duration	Enrichment culture temperature
43108	bamboo (Phyllostachys bambusoides) humus	Damyang, Jeonnam	Republic of Korea	KOR	Asia	starch casein agar	7 days	28
67669	Bamboo (Phyllostachys bambusoides) humus	Damyang, Jeonnam	Republic of Korea	KOR	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
67669	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID
66792	ASM937717v1 assembly for Streptomyces adustus NBRC 109810	contig	GCA_009377175	1609272.3	8023645914	1609272

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
43108	Streptomyces adustus gene for 16S ribosomal RNA, partial sequence	LC026279	1463		1609272

GC content

@ref	GC-content (mol%)	Method
67669	74.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces adustus NBRC 109810
NCBI: GCA_009377175

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	86.50	no
125439	motility	BacteriaNetⓘ	no	90.50	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces adustus strain NBRC 109810
PATRIC: 1609272.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.60	yes
125438	anaerobic	anaerobicⓘ	no	95.99	yes
125438	spore-forming	spore-formingⓘ	yes	90.73	no
125438	aerobic	aerobicⓘ	yes	89.15	yes
125438	thermophilic	thermophileⓘ	no	94.50	yes
125438	flagellated	motile2+ⓘ	no	87.50	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces acidicola sp. nov., isolated from a peat swamp forest in Thailand.	Lipun K, Chantavorakit T, Mingma R, Duangmal K	J Antibiot (Tokyo)	10.1038/s41429-020-0294-5	2020
Phylogeny	Streptomyces rhizosphaerihabitans sp. nov. and Streptomyces adustus sp. nov., isolated from bamboo forest soil.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001236	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43108	Hyo-Jin Lee, Kyung-Sook Whang: Streptomyces rhizosphaerihabitans sp. nov. and Streptomyces adustus sp. nov., isolated from bamboo forest soil. IJSEM 66: 3573 - 3578 2016 ( DOI 10.1099/ijsem.0.001236 , PubMed 27298302 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67669	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111621
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces adustus (NBRC 109810, KACC 17197, WH-9)

Name and taxonomic classification

Morphology

Cell morphology

Multicellular morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_009377175

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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