Name: Aquaspirillum soli THG-SQE6
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140473

Type strain:

Species: Aquaspirillum soli

Strain Designation: THG-SQE6

Culture col. no.: CCTCC AB 2016081, KACC 18846, JCM 30429

Strain history: T.-H. Yi; Kyung Hee Univ., South Korea; THG-SQE6.

NCBI tax ID(s): 1591092 (species)

Special Collections

Section

Aquaspirillum soli THG-SQE6 is a microaerophile, Gram-negative, motile bacterium that forms circular colonies and was isolated from soil sample of a reed pond.

colony-forming
Gram-negative
helical-shaped
motile
microaerophile
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Neisseriales*
	Family	*Chromobacteriaceae*
	Genus	*Aquaspirillum*
	Species	**Aquaspirillum soli**
	Full Scientific Name (LPSN)	Aquaspirillum soli Moya et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43221]	Gram stain	negative

[Ref.: #43221]	Cell length	5.3-9.3 µm

[Ref.: #43221]	Cell width	0.9-1.1 µm

[Ref.: #43221]	Cell shape	helical-shaped

[Ref.: #43221]	Motility	yes

[Ref.: #43221]	Colony size	1.0-2.0 mm
[Ref.: #43221]	Colony color	opaque white
[Ref.: #43221]	Colony shape	circular
[Ref.: #43221]	Incubation period	3-4 days
[Ref.: #43221]	Cultivation medium used	R2A

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43221]

Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

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Culture medium

TSA (tryptic soy agar)

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Culture medium growth

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Culture medium

nutritient agar (NA)

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Culture medium growth

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Culture medium

marine agar (MA)

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Culture medium growth

		Temperature
[Ref.: #43221]	optimum	25-42 °C
[Ref.: #43221]	growth	4-42 °C
[Ref.: #67770]	growth	28 °C

	pH	Kind of pH		pH
[Ref.: #43221]			optimum	6.5-7.5
[Ref.: #43221]			growth	6-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43221]

Oxygen tolerance

microaerophile

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43221]		NaCl		growth	0-1.5	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43221]	2-dehydro-D-gluconate ChEBI	-	assimilation
[Ref.: #43221]	3-hydroxybenzoate ChEBI	-	assimilation
[Ref.: #43221]	3-hydroxybutyrate ChEBI	+	assimilation
[Ref.: #43221]	4-hydroxybenzoate ChEBI	-	assimilation
[Ref.: #43221]	5-dehydro-D-gluconate ChEBI	-	assimilation
[Ref.: #43221]	adipate ChEBI	-	assimilation
[Ref.: #43221]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #43221]	casein	-	hydrolysis
[Ref.: #43221]	chitin ChEBI	-	hydrolysis
[Ref.: #43221]	D-glucose ChEBI	+	assimilation
[Ref.: #43221]	D-mannitol ChEBI	-	assimilation
[Ref.: #43221]	D-mannose ChEBI	-	assimilation
[Ref.: #43221]	D-ribose ChEBI	-	assimilation
[Ref.: #43221]	D-sorbitol ChEBI	-	assimilation
[Ref.: #43221]	decanoate ChEBI	-	assimilation
[Ref.: #43221]	dna ChEBI	-	hydrolysis
[Ref.: #43221]	esculin ChEBI	+	hydrolysis
[Ref.: #43221]	gluconate ChEBI	-	assimilation
[Ref.: #43221]	glucose ChEBI	+	builds acid from
[Ref.: #43221]	glycogen ChEBI	-	assimilation
[Ref.: #43221]	itaconate ChEBI	-	assimilation
[Ref.: #43221]	L-alanine ChEBI	+	assimilation
[Ref.: #43221]	L-arabinose ChEBI	-	assimilation
[Ref.: #43221]	L-fucose ChEBI	-	assimilation
[Ref.: #43221]	L-histidine ChEBI	-	assimilation
[Ref.: #43221]	L-proline ChEBI	+	assimilation
[Ref.: #43221]	L-rhamnose ChEBI	-	assimilation
[Ref.: #43221]	L-serine ChEBI	+	assimilation
[Ref.: #43221]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #43221]	lactate ChEBI	+	assimilation
[Ref.: #43221]	malate ChEBI	+	assimilation
[Ref.: #43221]	maltose ChEBI	-	assimilation
[Ref.: #43221]	melibiose ChEBI	-	assimilation
[Ref.: #43221]	myo-inositol ChEBI	-	assimilation
[Ref.: #43221]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #43221]	nitrate ChEBI	+	reduction
[Ref.: #43221]	phenylacetate ChEBI	-	assimilation
[Ref.: #43221]	propionate ChEBI	+	assimilation
[Ref.: #43221]	salicin ChEBI	+	assimilation
[Ref.: #43221]	sodium acetate ChEBI	+	assimilation
[Ref.: #43221]	sodium citrate ChEBI	-	assimilation
[Ref.: #43221]	sodium malonate ChEBI	-	assimilation
[Ref.: #43221]	starch ChEBI	-	hydrolysis
[Ref.: #43221]	suberic acid ChEBI	-	assimilation
[Ref.: #43221]	sucrose ChEBI	-	assimilation
[Ref.: #43221]	tween 20 ChEBI	-	hydrolysis
[Ref.: #43221]	tween 80 ChEBI	-	hydrolysis
[Ref.: #43221]	valerate ChEBI	+	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43221]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43221]	acid phosphatase	+	3.1.3.2
[Ref.: #43221]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43221]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43221]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43221]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43221]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43221]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43221]	beta-galactosidase	-	3.2.1.23
[Ref.: #43221]	beta-glucosidase	+	3.2.1.21
[Ref.: #43221]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43221]	catalase	+	1.11.1.6
[Ref.: #43221]	chymotrypsin	-	3.4.4.5
[Ref.: #43221]	cystine arylamidase	+	3.4.11.3
[Ref.: #43221]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43221]	esterase (C 4)	+
[Ref.: #43221]	esterase Lipase (C 8)	+
[Ref.: #43221]	leucine arylamidase	+	3.4.11.1
[Ref.: #43221]	lipase (C 14)	-
[Ref.: #43221]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43221]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #43221]	trypsin	+	3.4.21.4
[Ref.: #43221]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43221]

Fatty acid	Percentage
C16:1ω7c / C16:1ω6c	44.7
C16:0	21.3
C12:0 3OH	10.8
C18:1ω7c	8.9
C18:0	5.3
C18:3ω6,9,12c	1.5
C12:0 anteiso	1.5
C14:0	1.4
C10:0	1.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43221]	Sample type/isolated from	soil sample of a reed pond
[Ref.: #43221]	Geographic location (country and/or sea, region)	Shangqiu, Henan province
[Ref.: #43221]	Country	China
[Ref.: #43221]	Country ISO 3 Code	CHN
[Ref.: #43221]	Continent	Asia
[Ref.: #43221]	Geographic location	34.0000°/115.0000°
[Ref.: #43221]	Enrichment culture	nutrient agar (NA, Difco)
[Ref.: #43221]	Enrichment culture duration	1 week
[Ref.: #43221]	Enrichment culture temperature	28 ̊C
[Ref.: #43221]	Isolation/enrichment procedure	serial dilution plating method

[Ref.: #67770]	Sample type/isolated from	Soil of a reed pond in Shangqiu
[Ref.: #67770]	Geographic location (country and/or sea, region)	Henan Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Pond (small)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43221]	Aquaspirillum soli strain THG-SQE6 16S ribosomal RNA gene, partial sequence	KM598238	1453	GenBank ENA	1591092 tax ID

[Ref.: #67770]

GC-content

53.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #43221]

Culture collection no.

CCTCC AB 2016081, KACC 18846, JCM 30429

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aquaspirillum soli sp. nov., isolated from a soil sample.	Moya G, Trinh H, Yan ZF, Won KH, Yang JE, Wang QJ, Kook MC, Yi TH	Int J Syst Evol Microbiol	10.1099/ijsem.0.001802	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43221

Gabriela Moya, Huan Trinh, Zheng-Fei Yan, Kyung-Hwa Won, Jung-Eun Yang, Qi-Jun Wang, Moo-Chang Kook, Tae-Hoo Yi: Aquaspirillum soli sp. nov., isolated from a soil sample. IJSEM 67: 1312 - 1317 2017 ( DOI 10.1099/ijsem.0.001802 , PubMed 28109204 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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