Name: Mariniblastus fucicola FC18
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140461

Type strain:

Species: Mariniblastus fucicola

Strain Designation: FC18

Culture col. no.: LMG 29748, DSM 26290

Strain history: <- O. M. Lage, Faculty Sci., Univ. Porto, Portugal; FC18

NCBI tax ID(s): 980251 (species)

Section

Mariniblastus fucicola FC18 is an aerobe, chemoheterotroph, mesophilic bacterium that forms circular colonies and was isolated from microbial biofilm of the marine macroalga Fucus spiralis.

colony-forming
sphere-shaped
aerobe
chemoheterotroph
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Planctomycetota*
	Class	*Planctomycetia*
	Order	*Pirellulales*
	Family	*Pirellulaceae*
	Genus	*Mariniblastus*
	Species	**Mariniblastus fucicola**
	Full Scientific Name (PNU)	Mariniblastus fucicola Lage et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43193]	Cell length	2 µm
[Ref.: #43193]	Cell width	1 µm
[Ref.: #43193]	Cell shape	sphere-shaped
[Ref.: #43193]	Motility	no

[Ref.: #43193]	Colony color	white
[Ref.: #43193]	Colony shape	circular
[Ref.: #43193]	Cultivation medium used	M13 agar

[Ref.: #43193]	Colony color	light-pink
[Ref.: #43193]	Colony shape	circular
[Ref.: #43193]	Cultivation medium used	M14 agar

Information on culture and growth conditions Culture and growth conditions

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Culture medium

M13 agar

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Culture medium growth

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Culture medium

M14 agar

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Culture medium growth

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Culture medium

MODIFIED M13 VERRUCOMICROBIUM MEDIUM (DSMZ Medium 1601)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #43193]	optimum	25 °C
[Ref.: #43193]	growth	10-30 °C
[Ref.: #66478]	growth	25 °C

[Ref.: #43193]	Temperature range	mesophilic
[Ref.: #66478]	Temperature range	mesophilic

	pH	Kind of pH		pH	pH range
[Ref.: #43193]			optimum	7.5
[Ref.: #43193]			growth	6.5-8.5	alkaliphile

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Nutrition type

chemoheterotroph

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43193]		NaCl		growth	0.5-5.0	%
[Ref.: #43193]		NaCl		optimum	2.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43193]	2-oxoglutarate ChEBI	-	assimilation
[Ref.: #43193]	acetate ChEBI	-	assimilation
[Ref.: #43193]	ammonium ChEBI	+	nitrogen source
[Ref.: #43193]	arbutin ChEBI	-	degradation
[Ref.: #43193]	aspartate ChEBI	+	nitrogen source
[Ref.: #43193]	benzoate ChEBI	-	assimilation
[Ref.: #43193]	bromosuccinate ChEBI	-	assimilation
[Ref.: #43193]	casamino acids	+	assimilation
[Ref.: #43193]	casamino acids	+	nitrogen source
[Ref.: #43193]	cellobiose ChEBI	+	assimilation
[Ref.: #43193]	citrate ChEBI	-	assimilation
[Ref.: #43193]	cysteine ChEBI	-	nitrogen source
[Ref.: #43193]	cystine ChEBI	-	nitrogen source
[Ref.: #43193]	D-arabinose ChEBI	-	assimilation
[Ref.: #43193]	D-arabitol ChEBI	-	assimilation
[Ref.: #43193]	D-fructose ChEBI	+	assimilation
[Ref.: #43193]	D-galactose ChEBI	+	assimilation
[Ref.: #43193]	D-glucose ChEBI	+	assimilation
[Ref.: #43193]	D-mannitol ChEBI	+	assimilation
[Ref.: #43193]	D-ribose ChEBI	-	assimilation
[Ref.: #43193]	D-xylose ChEBI	+	assimilation
[Ref.: #43193]	erythritol ChEBI	-	assimilation
[Ref.: #43193]	esculin ChEBI	+	hydrolysis
[Ref.: #43193]	formate ChEBI	-	assimilation
[Ref.: #43193]	fumarate ChEBI	-	assimilation
[Ref.: #43193]	gelatin ChEBI	+	hydrolysis
[Ref.: #43193]	glycerol ChEBI	-	assimilation
[Ref.: #43193]	inulin ChEBI	-	assimilation
[Ref.: #43193]	L-alanine ChEBI	+	nitrogen source
[Ref.: #43193]	L-arabinose ChEBI	-	assimilation
[Ref.: #43193]	L-arginine ChEBI	-	nitrogen source
[Ref.: #43193]	L-asparagine ChEBI	-	nitrogen source
[Ref.: #43193]	L-fucose ChEBI	-	assimilation
[Ref.: #43193]	L-glutamate ChEBI	+	nitrogen source
[Ref.: #43193]	L-glutamine ChEBI	+	nitrogen source
[Ref.: #43193]	L-histidine ChEBI	-	nitrogen source
[Ref.: #43193]	L-lysine ChEBI	-	nitrogen source
[Ref.: #43193]	L-methionine ChEBI	-	nitrogen source
[Ref.: #43193]	L-phenylalanine ChEBI	-	nitrogen source
[Ref.: #43193]	L-proline ChEBI	+	nitrogen source
[Ref.: #43193]	L-rhamnose ChEBI	+	assimilation
[Ref.: #43193]	L-sorbose ChEBI	-	assimilation
[Ref.: #43193]	L-threonine ChEBI	-	nitrogen source
[Ref.: #43193]	L-valine ChEBI	-	nitrogen source
[Ref.: #43193]	lactose ChEBI	+	assimilation
[Ref.: #43193]	malate ChEBI	-	assimilation
[Ref.: #43193]	maltose ChEBI	+	assimilation
[Ref.: #43193]	myo-inositol ChEBI	-	assimilation
[Ref.: #43193]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #43193]	N-acetylglucosamine ChEBI	+	nitrogen source
[Ref.: #43193]	nitrate ChEBI	+	reduction
[Ref.: #43193]	nitrate ChEBI	+	nitrogen source
[Ref.: #43193]	nitrite ChEBI	-	nitrogen source
[Ref.: #43193]	peptone	+	nitrogen source
[Ref.: #43193]	pyruvate ChEBI	+	assimilation
[Ref.: #43193]	raffinose ChEBI	+	assimilation
[Ref.: #43193]	ribitol ChEBI	-	assimilation
[Ref.: #43193]	sorbitol ChEBI	-	assimilation
[Ref.: #43193]	starch ChEBI	-	degradation
[Ref.: #43193]	sucrose ChEBI	+	assimilation
[Ref.: #43193]	trehalose ChEBI	+	assimilation
[Ref.: #43193]	tryptophan ChEBI	-	nitrogen source
[Ref.: #43193]	tween 20 ChEBI	-	degradation
[Ref.: #43193]	tween 80 ChEBI	-	degradation
[Ref.: #43193]	tyrosine ChEBI	-	nitrogen source
[Ref.: #43193]	urea ChEBI	-	nitrogen source
[Ref.: #43193]	xylan ChEBI	-	degradation
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43193]	acid phosphatase	+	3.1.3.2
[Ref.: #43193]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43193]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43193]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43193]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43193]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43193]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43193]	arginine dihydrolase	+	3.5.3.6
[Ref.: #43193]	beta-galactosidase	-	3.2.1.23
[Ref.: #43193]	beta-glucosidase	-	3.2.1.21
[Ref.: #43193]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43193]	cystine arylamidase	-	3.4.11.3
[Ref.: #43193]	esterase (C 4)	-
[Ref.: #43193]	esterase Lipase (C 8)	-
[Ref.: #43193]	leucine arylamidase	+	3.4.11.1
[Ref.: #43193]	lipase (C 14)	-
[Ref.: #43193]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43193]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43193]	trypsin	-	3.4.21.4
[Ref.: #43193]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43193]

Fatty acid	Percentage	SD	ECL
C18:1ω9c	36.7	0.8	17769
C14:0	21.7	0.5	14000
C16:0	21.1	0.5	16
C18:0	8.9	0.4	18
C 16:1ω6c/C16:1ω7c/iso-C15:0 2-OH	5.8	0.3	15822
C18:1ω6c / C18:1ω7c	2.1	0.2	17823
C15:0 iso	1.2	0.2	14623
Unknown	0.8	0.1	20
Unknown	0.5	0.1	11970

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43193]	Sample type/isolated from	microbial biofilm of the marine macroalga Fucus spiralis
[Ref.: #43193]	Geographic location (country and/or sea, region)	Carreço, northern coast
[Ref.: #43193]	Country	Portugal
[Ref.: #43193]	Country ISO 3 Code	PRT
[Ref.: #43193]	Continent	Europe
[Ref.: #43193]	Geographic location	41.0000°/8.0000°
[Ref.: #43193]	Enrichment culture	HEP-PSO-buffered M13 medium
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Biofilm	-
#Host	#Microbial	-

What are isolation sources categories?

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Global distribution of 16S sequence HQ845450 (>99% sequence identity) for Mariniblastus fucicola subclade from Microbeatlas

Aquatic Samples	2357
Soil Samples	51
Animal Samples	18
Plant Samples	24
Total Samples	2450

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43193]	Planctomycetaceae bacterium FC18 16S ribosomal RNA gene, partial sequence	HQ845450	1439	GenBank	980251 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mariniblastus fucicola FC18	GCA_008087665	complete	GenBank	980251 tax ID	*
[Ref.: #66792]	Mariniblastus fucicola FC18	GCA_001642875	contig	GenBank	980251 tax ID	*
[Ref.: #66792]	Mariniblastus fucicola strain FC18	980251.5	complete	PATRIC	980251 tax ID	*
[Ref.: #66792]	Deltaproteobacteria bacterium YP2.bin2	GCA_021838995	scaffold	PATRIC	2026735 tax ID	*

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GC-content

54.2 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

LMG 29748, DSM 26290

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mariniblastus fucicola gen. nov., sp. nov. a novel planctomycete associated with macroalgae.	Lage OM, Albuquerque L, Lobo-da Cunha A, da Costa MS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001760	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43193

Olga Maria Lage, Luciana Albuquerque, Alexandre Lobo-da Cunha, Milton S. da Costa: Mariniblastus fucicola gen. nov., sp. nov. a novel planctomycete associated with macroalgae. IJSEM 67: 1571 - 1576 2017 ( DOI 10.1099/ijsem.0.001760 , PubMed 28036240 )

#66478

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26290

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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