Name: Altererythrobacter palmitatis DSM 104092
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140430

Type strain:

Species: Altererythrobacter palmitatis

Culture col. no.: DSM 104092, CCTCC AB 2016270, KCTC 52607, YIM 75004

Strain history: <- Wen-jun Li, Yunnan Institute of Microbiology

NCBI tax ID(s): 2054628 (species)

SI-ID 407775

DSM 104092

Section

Altererythrobacter palmitatis DSM 104092 is an aerobe, thermophilic bacterium that was isolated from sediment from a hot spring.

aerobe
thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Erythrobacteraceae*
	Genus	*Altererythrobacter*
	Species	**Altererythrobacter palmitatis**
	Full Scientific Name (LPSN)	Altererythrobacter palmitatis Yuan et al. 2017

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43037]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #43037]

Culture medium growth

[Ref.: #43037]

Culture medium link

Medium recipe at MediaDive

[Ref.: #43037]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #43037]			growth	45 °C
[Ref.: #67771]			growth	37 °C

[Ref.: #43037]	Temperature range	thermophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43037]	Sample type/isolated from	sediment from a hot spring
[Ref.: #43037]	Geographic location (country and/or sea, region)	Tibet, Tagejia geothermal field (29° 24' 51.11''N, 86° 43' 58.02''E)
[Ref.: #43037]	Country	China
[Ref.: #43037]	Country ISO 3 Code	CHN
[Ref.: #43037]	Continent	Asia
[Ref.: #43037]	Geographic location	29.4142°/86.7328°

[Ref.: #67771]	Sample type/isolated from	From the sediment of hot spring
[Ref.: #67771]	Geographic location (country and/or sea, region)	Tagejia geothermal's hot spring of Tibet
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Condition	#Thermophilic (>45°C)	-
#Environmental	#Aquatic	#Sediment
#Environmental	#Aquatic	#Thermal spring

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX808674 (>99% sequence identity) for Altererythrobacter from Microbeatlas

Aquatic Samples	238
Soil Samples	125
Animal Samples	43
Plant Samples	10
Total Samples	416

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #43037]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43037]	Altererythrobacter palmitatis strain YIM 75004 16S ribosomal RNA gene, partial sequence	KX808674	1505	ENA	2054628 tax ID

[Ref.: #43037]

GC-content

60.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #43037]

Culture collection no.

DSM 104092, CCTCC AB 2016270, KCTC 52607, YIM 75004

[Ref.: #96703]

SI-ID 407775

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Altererythrobacter lauratis sp. nov. and Altererythrobacter palmitatis sp. nov., isolated from a Tibetan hot spring.	Yuan CG, Chen X, Jiang Z, Chen W, Liu L, Xian WD, Asem MD, Zhi XY, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-017-0882-y	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43037

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 104092

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96703

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407775.1 )

* These data were automatically processed and therefore are not curated

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