Halalkalibacter kiskunsagensis B16-24 is a facultative anaerobe, moderately halophilic, spore-forming bacterium that forms circular colonies and was isolated from soda rhizosphere soil of the bayonet gras .
spore-forming Gram-positive rod-shaped colony-forming facultative anaerobe moderately halophilic genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Bacillaceae |
| Genus Halalkalibacter |
| Species Halalkalibacter kiskunsagensis |
| Full scientific name Halalkalibacter kiskunsagensis (Borsodi et al. 2017) Joshi et al. 2022 |
| Synonyms (2) |
| @ref | Gram stain | Cell length | Cell width | Cell shape | Motility | |
|---|---|---|---|---|---|---|
| 43900 | positive | 1.5-2.5 µm | 0.5-0.7 µm | rod-shaped |
| @ref | Colony color | Colony shape | Incubation period | Medium used | |
|---|---|---|---|---|---|
| 43900 | creamish white | circular | 1-2 days | Horikoshi alkaline medium |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 43900 | Horikoshi alkaline medium | 10.0 g/L D-glucose, 5.0 g/L peptone, 5.0 g/L yeast extract, 1.0 g/L KH2PO4, 0.2 g/L MgSO4.7H2O, 5.0 g/L Na2CO3, 15.0 g/L agar, pH 9.0 | |||
| 43900 | Nutrient agar (NA) | supplemented with 5% (w/v) NaCl | |||
| 43900 | Reasoner's 2A agar (R2A) | supplemented with 5% (w/v) NaCl | |||
| 43011 | HORIKOSHI ALKALINE (DSMZ Medium 940) | Medium recipe at MediaDive | Name: HORIKOSHI ALKALINE (DSMZ Medium 940) Composition: Agar 15.0 g/l D-Glucose 10.0 g/l Na2CO3 5.0 g/l Yeast extract 5.0 g/l Peptone 5.0 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Distilled water |
| 43900 | Oxygen tolerancefacultative anaerobe |
| @ref | Spore description | Type of spore | Spore formation | |
|---|---|---|---|---|
| 43900 | central, ellipsoidal endospores in slightly swollen sporangia | endospore |
| 43900 | Observationquinone MK-7 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 43900 | 22653 ChEBI | asparagine | - | carbon source | |
| 43900 | casein | - | hydrolysis | ||
| 43900 | 16947 ChEBI | citrate | - | carbon source | |
| 43900 | 15824 ChEBI | D-fructose | + | carbon source | |
| 43900 | 12936 ChEBI | D-galactose | - | carbon source | |
| 43900 | 17634 ChEBI | D-glucose | - | builds acid from | |
| 43900 | 17634 ChEBI | D-glucose | - | builds gas from | |
| 43900 | 17634 ChEBI | D-glucose | + | carbon source | |
| 43900 | 16024 ChEBI | D-mannose | - | carbon source | |
| 43900 | 63150 ChEBI | D-rhamnose | - | carbon source | |
| 43900 | 16988 ChEBI | D-ribose | - | carbon source | |
| 43900 | 65327 ChEBI | D-xylose | - | carbon source | |
| 43900 | 16449 ChEBI | dl-alanine | + | carbon source | |
| 43900 | 4853 ChEBI | esculin | + | hydrolysis | |
| 43900 | 16813 ChEBI | galactitol | - | carbon source | |
| 43900 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 43900 | 17234 ChEBI | glucose | - | fermentation | |
| 43900 | 17754 ChEBI | glycerol | - | carbon source | |
| 43900 | 30849 ChEBI | L-arabinose | - | carbon source | |
| 43900 | 17115 ChEBI | L-serine | + | carbon source | |
| 43900 | 17716 ChEBI | lactose | - | carbon source | |
| 43900 | 17306 ChEBI | maltose | - | carbon source | |
| 43900 | 17268 ChEBI | myo-inositol | - | carbon source | |
| 43900 | 17632 ChEBI | nitrate | + | reduction | |
| 43900 | 32954 ChEBI | sodium acetate | - | carbon source | |
| 43900 | 62965 ChEBI | sodium formate | - | carbon source | |
| 43900 | 50144 ChEBI | sodium pyruvate | - | carbon source | |
| 43900 | 28017 ChEBI | starch | - | hydrolysis | |
| 43900 | 17992 ChEBI | sucrose | - | carbon source | |
| 43900 | 27082 ChEBI | trehalose | + | carbon source | |
| 43900 | 53426 ChEBI | tween 80 | - | hydrolysis | |
| 43900 | 16199 ChEBI | urea | - | hydrolysis |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) | |
| #Condition | #Alkaline | - | |
| #Condition | #Saline | - | |
| #Environmental | #Terrestrial | #Soil | |
| #Host Body-Site | #Plant | #Rhizosphere |
| @ref | Sample type | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | Enrichment culture | Enrichment culture composition | Enrichment culture duration | Enrichment culture temperature | Host species | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43011 | soda rhizosphere soil of the bayonet gras (Bolboschoenus maritimus) | Kiskunság National Park, Böddi-szék soda pond (N46° 46', E019° 08') | Hungary | HUN | Europe | 46.7667 | 19.1333 46.7667/19.1333 | Bolboschoenus maritimus | ||||||
| 43900 | rhizosphere soil of bayonet grass Bolboschoenus maritimus on the shores of the Böddi-szék soda pond in the Kiskunság National Park, Hungary | 09-2013 | Böddi-szék soda pond in the Kiskunság National Park | Hungary | HUN | Europe | 46.7667 | 19.1333 46.7667/19.1333 | Horikoshi alkaline medium 940 | 10.0 g/L D-glucose, 5.0 g/L peptone, 5.0 g/L yeast extract, 1.0 g/L KH2PO4, 0.2 g/L MgSO4.7H2O, 5.0 g/L Na2CO3, 15.0 g/L agar, pH 9.0 | 6 days | 28 |
Global distribution of 16S sequence LN610501 (>99% sequence identity) for Alkalihalobacillus from Microbeatlas ![]()
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 43011 | 1 | Risk group (German classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM4243375v1 assembly for Halalkalibacter kiskunsagensis NCAIM B.02610 | contig | 1548599 | 56.82 | |||
| 124043 | ASM3702755v1 assembly for Halalkalibacter kiskunsagensis DSM 29791 | contig | 1548599 | 55.16 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 43011 | Bacillus sp. B16-24 partial 16S rRNA gene, strain B16-24 | LN610501 | 1444 | 1548599 | ||
| 124043 | Bacillus kiskunsagensis strain NCAIM B.02610 16S ribosomal RNA gene, partial sequence. | MT758128 | 790 | 1548599 | ||
| 124043 | Bacillus kiskunsagensis strain NCAIM B.02610 16S ribosomal RNA gene, partial sequence. | MT759947 | 790 | 1548599 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 43900 | 36.6 | high performance liquid chromatography (HPLC) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera. | Joshi A, Thite S, Karodi P, Joseph N, Lodha T. | Front Microbiol | 10.3389/fmicb.2021.722369 | 2021 | ||
| Phylogeny | Bacillus suaedae sp. nov., isolated from the stem of Suaeda aralocaspica in north-west China. | Lei RF, Ma Q, Li YQ, Abudourousuli D, Wang S, Rouzi Z, Aosiman M, An DD, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005362 | 2022 | |
| Phylogeny | Bacillus kiskunsagensis sp. nov., a novel alkaliphilic and moderately halophilic bacterium isolated from soda soil. | Borsodi AK, Toth E, Aszalos JM, Barany A, Schumann P, Sproer C, Kovacs AL, Marialigeti K, Szili-Kovacs T | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002149 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #43011 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29791 |
| #43900 | Andrea K. Borsodi, Erika Tóth, Júlia M. Aszalós, Ágnes Bárány, Peter Schumann, Cathrin Spröer, Attila L. Kovács, Károly Márialigeti, Tibor Szili-Kovács: Bacillus kiskunsagensis sp. nov., a novel alkaliphilic and moderately halophilic bacterium isolated from soda soil. IJSEM 67: 3490 - 3495 2017 ( DOI 10.1099/ijsem.0.002149 , PubMed 28857030 ) |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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