Heliorestis acidaminivorans (DSM 24790, ATCC BAA-2399, NCMAB119)

Name: Heliorestis acidaminivorans (DSM 24790, ATCC BAA-2399, NCMAB119)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140389

Type strain

Strain Designation NCMAB119, HR10B

Culture col. no. DSM 24790 ATCC BAA-2399 NCMAB119 HR10B

NCBI tax ID(s) 553427

Special Collections DSMZ

History <- M. Madigan, Dept. Microbiology, Southern Illinois Univ., Carbondale, USA; HR10B <- M. Asao

Links

Heliorestis acidaminivorans NCMAB119 is a bacterium that was isolated from sediments.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 404467

ATCC BAA-2399,NCMA B119,DSM 24790

@ref 20215

Last LPSN update 2026-02-09 11:33:36

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Heliobacteriaceae

Genus Heliorestis

Species Heliorestis acidaminivorans

Full scientific name Heliorestis acidaminivorans Asao et al. 2021

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
42996	1/2 S° HELIORESTIS MEDIUM (DSMZ Medium 1381)		Medium recipe at MediaDive	Name: ½ S° HELIORESTIS MEDIUM (DSMZ Medium 1381) Composition: Na2CO3 2.5 g/l NaHCO3 2.5 g/l Bicine 1.63 g/l Na-acetate 1.0 g/l Na-pyruvate 1.0 g/l KH2PO4 0.5 g/l NH4Cl 0.5 g/l Na2S2O3 x 5 H2O 0.5 g/l Na2S x 9 H2O 0.5 g/l MgSO4 x 7 H2O 0.2 g/l Yeast extract 0.1 g/l CaCl2 0.075 g/l EDTA 0.0052 g/l FeCl2 x 4 H2O 0.0015 g/l CoCl2 x 6 H2O 0.00019 g/l Na2MoO4 x 2 H2O 0.000188 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l VOSO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2.5e-05 g/l Vitamin B12 2e-05 g/l CuCl2 x 2 H2O 1.7e-05 g/l H3BO3 6e-06 g/l NaHSeO3 2e-06 g/l Na2WO4 x 2 H2O 2e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
42996	positive	growth	33

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		98.8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
42996	sediments	Northwest of Cairo, Wadi El Natrun, Lake Hamra	Egypt	EGY	Africa

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM893395v1 assembly for Heliorestis acidaminivorans DSM 24790	contig	GCA_008933955	553427.4	2914073641	553427	68.27

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42996	Heliorestis acidaminivorans strain HR10B 16S ribosomal RNA gene, partial sequence	EU908049	1559		553427

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Heliorestis acidaminivorans DSM 24790
NCBI: GCA_008933955

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.80	no
125439	motility	BacteriaNetⓘ	no	71.70	no
125439	gram_stain	BacteriaNetⓘ	negative	85.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	84.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Heliorestis acidaminivorans strain DSM 24790
PATRIC: 553427.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	52.37	no
125438	anaerobic	anaerobicⓘ	yes	84.14	no
125438	spore-forming	spore-formingⓘ	yes	76.15	no
125438	aerobic	aerobicⓘ	no	90.26	no
125438	thermophilic	thermophileⓘ	no	79.90	no
125438	flagellated	motile2+ⓘ	yes	71.90	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Amino acid-assimilating phototrophic heliobacteria from soda lake environments: Heliorestis acidaminivorans sp. nov. and 'Candidatus Heliomonas lunata'.	Asao M, Takaichi S, Madigan MT	Extremophiles	10.1007/s00792-012-0458-8	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42996	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24790
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Heliorestis acidaminivorans (DSM 24790, ATCC BAA-2399, NCMAB119)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_008933955

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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