Name: Limosilactobacillus caviae MOZM2
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140356

Type strain:

Species: Limosilactobacillus caviae

Strain Designation: MOZM2

Culture col. no.: DSM 100239, CCM 8609, LMG 28780

Strain history: <- J. Killer, Inst. Animal Physiol. and Genetics, Czech Acad. Sci., Prague; MOZM2

NCBI tax ID(s): 1769424 (species)

SI-ID 397301

DSM 100239

Special Collections

Section

When using BacDive for research please cite our paper

Limosilactobacillus caviae MOZM2 is an anaerobe, Gram-positive, rod-shaped bacterium that forms circular colonies and was isolated from oral cavity of a guinea pig .

colony-forming
Gram-positive
rod-shaped
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Limosilactobacillus*
	Species	**Limosilactobacillus caviae**
	Full Scientific Name (LPSN)	Limosilactobacillus caviae (Killer et al. 2017) Zheng et al. 2020

Synonym

Lactobacillus caviae

Information on morphological and physiological properties Morphology

[Ref.: #43460]	Gram stain	positive
[Ref.: #125438]	Gram stain	positive Confidence in %92.849

[Ref.: #43460]	Cell length	1.2-8.5 µm

[Ref.: #43460]	Cell width	0.4-0.8 µm

[Ref.: #43460]	Cell shape	rod-shaped

[Ref.: #43460]	Motility	no
[Ref.: #125438]	Motility	no Confidence in %90.5

[Ref.: #43460]	Colony size	1.1-2.4 mm
[Ref.: #43460]	Colony color	yellowish
[Ref.: #43460]	Colony shape	circular
[Ref.: #43460]	Incubation period	3 days
[Ref.: #43460]	Cultivation medium used	TPY and MRS agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43460]

Culture medium

TPY and MRS agar

[Ref.: #43460]

Culture medium growth

[Ref.: #42963]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #42963]

Culture medium growth

[Ref.: #42963]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42963]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42963]			growth	37 °C
[Ref.: #43460]			growth	20-45 °C

	pH	Kind of pH		pH
[Ref.: #43460]			growth	4.5-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43460]	Oxygen tolerance	anaerobe
[Ref.: #125439]	Oxygen tolerance	obligate aerobe Confidence in %92.6

[Ref.: #43460]

Ability of spore formation

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43460]	amygdalin ChEBI	-	assimilation
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	arabinose ChEBI	+/-	assimilation
[Ref.: #43460]	arbutin ChEBI	-	assimilation
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	cellobiose ChEBI	-	assimilation
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-fructose ChEBI	-	assimilation
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-fucose ChEBI	-	builds acid from
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-galactose ChEBI	+	assimilation
[Ref.: #43460]	D-galactose ChEBI	+	fermentation
[Ref.: #68371]	D-galactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-glucose ChEBI	+	assimilation
[Ref.: #43460]	D-glucose ChEBI	+	fermentation
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-lyxose ChEBI	-	builds acid from
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-mannitol ChEBI	-	assimilation
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-mannose ChEBI	-	assimilation
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-ribose ChEBI	+	assimilation
[Ref.: #43460]	D-ribose ChEBI	+	fermentation
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-sorbitol ChEBI	-	assimilation
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-tagatose ChEBI	-	builds acid from
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	D-xylose ChEBI	+	assimilation
[Ref.: #43460]	D-xylose ChEBI	+	fermentation
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	erythritol ChEBI	-	builds acid from
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	esculin ChEBI	-	assimilation
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	galactitol ChEBI	-	builds acid from
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	gelatin ChEBI	-	hydrolysis
[Ref.: #43460]	gentiobiose ChEBI	-	builds acid from
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	glycerol ChEBI	-	builds acid from
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	glycogen ChEBI	-	builds acid from
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	inulin ChEBI	-	builds acid from
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	L-arabinose ChEBI	+	assimilation
[Ref.: #68371]	L-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	L-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	L-fucose ChEBI	-	builds acid from
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	L-sorbose ChEBI	-	builds acid from
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	lactose ChEBI	+	assimilation
[Ref.: #43460]	lactose ChEBI	+	fermentation
[Ref.: #68371]	lactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	maltose ChEBI	+	assimilation
[Ref.: #43460]	maltose ChEBI	+	fermentation
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	melezitose ChEBI	-	assimilation
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	melibiose ChEBI	+	assimilation
[Ref.: #43460]	melibiose ChEBI	+	fermentation
[Ref.: #68371]	melibiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #43460]	methyl alpha-D-glucopyranoside ChEBI	+	fermentation
[Ref.: #43460]	methyl alpha-D-glucopyranoside ChEBI	+/-	assimilation
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	myo-inositol ChEBI	-	builds acid from
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	nitrate ChEBI	-	reduction
[Ref.: #43460]	potassium 2-dehydro-D-gluconate	-	builds acid from
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	potassium 5-dehydro-D-gluconate	-	builds acid from
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	potassium gluconate ChEBI	+	fermentation
[Ref.: #43460]	potassium gluconate ChEBI	+/-	assimilation
[Ref.: #43460]	raffinose ChEBI	+	assimilation
[Ref.: #43460]	raffinose ChEBI	+	fermentation
[Ref.: #68371]	raffinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	ribitol ChEBI	-	builds acid from
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	salicin ChEBI	-	assimilation
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	starch ChEBI	+	assimilation
[Ref.: #43460]	starch ChEBI	+	fermentation
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	sucrose ChEBI	+	assimilation
[Ref.: #43460]	sucrose ChEBI	+	fermentation
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #43460]	trehalose ChEBI	-	assimilation
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	turanose ChEBI	-	builds acid from
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	xylitol ChEBI	-	builds acid from
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #43460]	xylose ChEBI	+/-	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #43460]	acetate ChEBI	yes
[Ref.: #43460]	indole ChEBI	no
[Ref.: #43460]	lactate ChEBI	yes
[Ref.: #43460]	propionate ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #43460]	6-phospho-beta-galactosidase	-	3.2.1.85
[Ref.: #43460]	acid phosphatase	+	3.1.3.2
[Ref.: #43460]	alanine arylamidase	-	3.4.11.2
[Ref.: #43460]	alkaline phosphatase	-	3.1.3.1
[Ref.: #43460]	alpha-arabinosidase	-	3.2.1.55
[Ref.: #43460]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43460]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43460]	alpha-galactosidase	+	3.2.1.22
[Ref.: #43460]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43460]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43460]	arginine arylamidase	+
[Ref.: #43460]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43460]	beta-galactosidase	+/-	3.2.1.23
[Ref.: #43460]	beta-glucosidase	-	3.2.1.21
[Ref.: #43460]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43460]	catalase	-	1.11.1.6
[Ref.: #43460]	cystine arylamidase	-	3.4.11.3
[Ref.: #43460]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43460]	esterase (C 4)	-
[Ref.: #43460]	esterase Lipase (C 8)	+
[Ref.: #43460]	glutamate decarboxylase	-	4.1.1.15
[Ref.: #43460]	glutamyl-glutamate arylamidase	-
[Ref.: #43460]	glycin arylamidase	-
[Ref.: #43460]	histidine arylamidase	-
[Ref.: #43460]	leucine arylamidase	+	3.4.11.1
[Ref.: #43460]	leucyl glycin arylamidase	+	3.4.11.1
[Ref.: #43460]	lipase (C 14)	-
[Ref.: #43460]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43460]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43460]	phenylalanine arylamidase	-
[Ref.: #43460]	proline-arylamidase	-	3.4.11.5
[Ref.: #43460]	pyroglutamic acid arylamidase	-
[Ref.: #43460]	serine arylamidase	-
[Ref.: #43460]	trypsin	-	3.4.21.4
[Ref.: #43460]	tyrosine arylamidase	-
[Ref.: #43460]	urease	-	3.5.1.5
[Ref.: #43460]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #42963]	15684	-	-	-	-	+	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42963]	Sample type/isolated from	oral cavity of a guinea pig (Cavia aperea f. porcellus)
[Ref.: #42963]	Host species	Cavia aperea f. porcellus
[Ref.: #42963]	Geographic location (country and/or sea, region)	Central Bohemia, Prague
[Ref.: #42963]	Country	Czech Republic
[Ref.: #42963]	Country ISO 3 Code	CZE
[Ref.: #42963]	Continent	Europe

[Ref.: #43460]	Sample type/isolated from	oral cavity of a 10-month-old male home-bred guinea pig
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Rodentia (Other)
#Host Body-Site	#Oral cavity and airways	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42963]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42963]	Limosilactobacillus caviae strain MOZM2 16S ribosomal RNA gene, partial sequence	KT343143	1487	GenBank ENA	1769424 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Limosilactobacillus caviae CCM 8609	GCA_014635905	contig	GenBank ENA	1769424 tax ID	*
[Ref.: #66792]	Lactobacillus caviae strain CCM 8609	1769424.3	wgs	PATRIC	1769424 tax ID	*
[Ref.: #66792]	Limosilactobacillus caviae DSM 100239	2901223847	draft	JGI IMG/M	1769424 tax ID	*

[Ref.: #42963]

GC-content

37.7 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus caviae strain CCM 8609 PATRIC: 1769424.3
[Ref.: #125438]	gram-positive	gram-positiveⓘ	yes	92.849	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	81.033	no
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	87.11	yes
[Ref.: #125438]	aerobic	aerobicⓘ	no	91.455	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	96	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	no	90.5	yes

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Limosilactobacillus caviae CCM 8609 NCBI: GCA_014635905
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	67.9
[Ref.: #125439]	BacteriaNet	motilityⓘ	no	59.5
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	positive	88.3
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	92.6

Availability in culture collections External links

[Ref.: #42963]

Culture collection no.

DSM 100239, CCM 8609, LMG 28780

[Ref.: #96654]

SI-ID 397301

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus caviae sp. nov., an obligately heterofermentative bacterium isolated from the oral cavity of a guinea pig (Cavia aperea f. porcellus).	Killer J, Pechar R, Svec P, Salmonova H, Svejstil R, Geigerova M, Rada V, Vlkova E, Mekadim C	Int J Syst Evol Microbiol	10.1099/ijsem.0.002044	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42963

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100239

#43460

Jiri Killer, Radko Pechar, Pavel Švec, Hana Salmonova, Roman Švejstil, Martina Geigerova, Vojtech Rada, Eva Vlkova, Chahrazed Mekadim: Lactobacillus caviae sp. nov., an obligately heterofermentative bacterium isolated from the oral cavity of a guinea pig (Cavia aperea f. porcellus). IJSEM 67: 2903 - 2909 2017 ( DOI 10.1099/ijsem.0.002044 , PubMed 28820096 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68371

Automatically annotated from API 50CH acid .

#96654

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397301.1 )

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Lactobacillus caviae strain CCM 8609

Limosilactobacillus caviae CCM 8609

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Change proposal