Name: Occidentia massiliensis 0S18
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140332

Type strain:

Species: Occidentia massiliensis

Strain Designation: 0S18

Culture col. no.: DSM 24860, CSUR P764

Strain history: <- O. Mediannikov, Centre National de la Recherche Scientifique, Marseille, France; 0S18

NCBI tax ID(s): 752179 (species)

SI-ID 397419

DSM 24860

Section

Occidentia massiliensis 0S18 is a mesophilic bacterium that was isolated from soft tick Ornithodoros sonrai.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rickettsiales*
	Family	*Rickettsiaceae*
	Genus	*Occidentia*
	Species	**Occidentia massiliensis**
	Full Scientific Name (LPSN)	Occidentia massiliensis Mediannikov et al. 2017

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42939]

Culture medium

BME/CTVM2 CELL LINE MEDIUM (DSMZ Medium 1670)

[Ref.: #42939]

Culture medium growth

[Ref.: #42939]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42939]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42939]			growth	28 °C

[Ref.: #42939]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42939]	Sample type/isolated from	soft tick Ornithodoros sonrai
[Ref.: #42939]	Host species	Ornithodoros sonrai
[Ref.: #42939]	Geographic location (country and/or sea, region)	Soulkhu-Thisse village
[Ref.: #42939]	Country	Senegal
[Ref.: #42939]	Country ISO 3 Code	SEN
[Ref.: #42939]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host

#Arthropoda

#Tick

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence GU937608 (>99% sequence identity) for Occidentia massiliensis subclade from Microbeatlas

Aquatic Samples	637
Soil Samples	10
Animal Samples	211
Plant Samples	4
Total Samples	862

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42939]	Occidentia massiliensis strain Os18 16S ribosomal RNA gene, partial sequence	GU937608	1425	ENA	752179 tax ID

[Ref.: #42939]

GC-content

29.05 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #42939]

Culture collection no.

DSM 24860, CSUR P764

[Ref.: #96635]

SI-ID 397419

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42939

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24860

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96635

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397419.1 )

* These data were automatically processed and therefore are not curated

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