Name: Weeksella massiliensis FF8
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140330

Type strain:

Species: Weeksella massiliensis

Strain Designation: FF8

Culture col. no.: DSM 28259, CSUR P860

Strain history: <- C. I. Lo, URMITE, Univ. Méditerranée, Marseille, France; FF8

NCBI tax ID(s): 1461577 (species)

SI-ID 396791

DSM 28259

Section

Weeksella massiliensis FF8 is a mesophilic human pathogen that was isolated from urine of a 65-year-old man with acute cystitis.

human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Weeksella*
	Species	**Weeksella massiliensis**
	Full Scientific Name (LPSN)	Weeksella massiliensis Sankar et al. 2017

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #42937]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42937]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #42937]

Culture medium growth

[Ref.: #42937]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42937]

Culture medium composition

expand / minimize

[Ref.: #42937]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #42937]

Culture medium growth

[Ref.: #42937]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42937]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42937]			growth	37 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42937]	Sample type/isolated from	urine of a 65-year-old man with acute cystitis
[Ref.: #42937]	Geographic location (country and/or sea, region)	Dakar
[Ref.: #42937]	Country	Senegal
[Ref.: #42937]	Country ISO 3 Code	SEN
[Ref.: #42937]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host Body Product

#Fluids

#Urine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HG931340 (>99% sequence identity) for Weeksella massiliensis subclade from Microbeatlas

Aquatic Samples	188
Soil Samples	161
Animal Samples	825
Plant Samples	23
Total Samples	1197

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42937]	Pathogenicity (human)	yes, in single cases
[Ref.: #42937]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42937]	Weeksella sp. FF8 partial 16S rRNA gene, isolate FF8	HG931340	1483	ENA	1461577 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Weeksella massiliensis FF8	2617271200	draft	JGI IMG/M	1461577 tax ID	*

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GC-content

35.9 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #42937]

Culture collection no.

DSM 28259, CSUR P860

[Ref.: #96633]

SI-ID 396791

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Noncontiguous finished genome sequence and description of Weeksella massiliensis sp. nov.	Sankar SA, Lo CI, Fall B, Sambe-Ba B, Mediannikov O, Diallo I, Labas N, Faye N, Wade B, Raoult D, Fournier PE, Fenollar F	New Microbes New Infect	10.1016/j.nmni.2015.09.013	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42937

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28259

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96633

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396791.1 )

* These data were automatically processed and therefore are not curated

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