Name: Mobilicoccus caccae DSM 27611
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140308

Type strain:

Species: Mobilicoccus caccae

Culture col. no.: DSM 27611, CCTCC AB 2013229, YIM 101593, JCM 33578, NBRC 113072

Strain history: CCTCC AB 2013229 <-- Y. Jiang; Yunnan Inst. of Microbiol., Yunnan Univ., China; YIM 101593.

NCBI tax ID(s): 1859295 (species)

SI-ID 404542

DSM 27611

Section

Mobilicoccus caccae DSM 27611 is a facultative anaerobe, Gram-positive, motile bacterium that was isolated from faeces of a primate .

coccus-shaped
Gram-positive
motile
facultative anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Dermatophilaceae*
	Genus	*Mobilicoccus*
	Species	**Mobilicoccus caccae**
	Full Scientific Name (LPSN)	Mobilicoccus caccae Chen et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43282]	Gram stain	positive
[Ref.: #43282]	Cell width	0.5-1.0 µm
[Ref.: #43282]	Cell shape	coccus-shaped
[Ref.: #43282]	Motility	yes
[Ref.: #43282]	Flagellum arrangement	peritrichous

[Ref.: #43282]	Colony color	orange
[Ref.: #43282]	Cultivation medium used	ISP4

[Ref.: #43282]	Colony color	orange
[Ref.: #43282]	Cultivation medium used	ISP5

[Ref.: #43282]	Colony color	orange-yellow
[Ref.: #43282]	Cultivation medium used	ISP2

[Ref.: #43282]	Colony color	orange-yellow
[Ref.: #43282]	Cultivation medium used	NA

[Ref.: #43282]	Colony color	orange-yellow
[Ref.: #43282]	Cultivation medium used	TSA

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ISP4

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Culture medium growth

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Culture medium

ISP5

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Culture medium growth

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Culture medium

ISP2

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

Trypticase Soy Agar (TSA)

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Culture medium growth

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Culture medium

TSB

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Culture medium growth

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #42915]	growth	28 °C
[Ref.: #43282]	growth	5-40 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #42915]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43282]			optimum	7-8
[Ref.: #43282]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

facultative anaerobe

[Ref.: #43282]	Type of spore	spore
[Ref.: #43282]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43282]		NaCl		growth	0-9	%(w/v)
[Ref.: #43282]		NaCl		optimum	0-3	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-8(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43282]	alanine ChEBI	+	assimilation
[Ref.: #43282]	amygdalin ChEBI	+	fermentation
[Ref.: #43282]	casein	-	hydrolysis
[Ref.: #43282]	cellulose ChEBI	-	hydrolysis
[Ref.: #43282]	citrate ChEBI	+	assimilation
[Ref.: #43282]	D-glucose ChEBI	+	assimilation
[Ref.: #43282]	D-glucose ChEBI	+	fermentation
[Ref.: #43282]	D-mannitol ChEBI	+	assimilation
[Ref.: #43282]	D-mannitol ChEBI	+	fermentation
[Ref.: #43282]	D-sorbitol ChEBI	+	fermentation
[Ref.: #43282]	fructose ChEBI	+	assimilation
[Ref.: #43282]	galactose ChEBI	+	assimilation
[Ref.: #43282]	L-arabinose ChEBI	+	assimilation
[Ref.: #43282]	L-arabinose ChEBI	-	fermentation
[Ref.: #43282]	L-rhamnose ChEBI	-	fermentation
[Ref.: #43282]	lysine ChEBI	+	assimilation
[Ref.: #43282]	mannose ChEBI	+	assimilation
[Ref.: #43282]	melibiose ChEBI	-	fermentation
[Ref.: #43282]	myo-inositol ChEBI	+	fermentation
[Ref.: #43282]	nitrate ChEBI	+	reduction
[Ref.: #43282]	raffinose ChEBI	+	assimilation
[Ref.: #43282]	starch ChEBI	-	hydrolysis
[Ref.: #43282]	sucrose ChEBI	+	assimilation
[Ref.: #43282]	sucrose ChEBI	+	fermentation
[Ref.: #43282]	tryptophan ChEBI	+	assimilation
[Ref.: #43282]	xylan ChEBI	-	assimilation
[Ref.: #43282]	xylitol ChEBI	-	assimilation
[Ref.: #43282]	xylose ChEBI	+	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #43282]	acetoin ChEBI	yes
[Ref.: #43282]	hydrogen sulfide ChEBI	no
[Ref.: #43282]	indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43282]	acid phosphatase	+	3.1.3.2
[Ref.: #43282]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43282]	alpha-chymotrypsin	+/-	3.4.21.1
[Ref.: #43282]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43282]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43282]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43282]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43282]	arginine dihydrolase	+	3.5.3.6
[Ref.: #43282]	beta-galactosidase	-	3.2.1.23
[Ref.: #43282]	beta-glucosidase	+	3.2.1.21
[Ref.: #43282]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43282]	catalase	+	1.11.1.6
[Ref.: #43282]	cystine arylamidase	+	3.4.11.3
[Ref.: #43282]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43282]	esterase (C 4)	+/-
[Ref.: #43282]	esterase Lipase (C 8)	+/-
[Ref.: #43282]	gelatinase	+
[Ref.: #43282]	leucine arylamidase	+	3.4.11.1
[Ref.: #43282]	lipase (C 14)	-
[Ref.: #43282]	lysine decarboxylase	-	4.1.1.18
[Ref.: #43282]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43282]	naphthol-AS-BI-phosphohydrolase	+/-
[Ref.: #43282]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #43282]	trypsin	+/-	3.4.21.4
[Ref.: #43282]	tryptophan deaminase	-	4.1.99.1
[Ref.: #43282]	urease	-	3.5.1.5
[Ref.: #43282]	valine arylamidase	+/-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43282]

Fatty acid	Percentage
C17:1ω8c	28.5
C15:0	20.2
anteiso-C17:1 B / iso-C17:1 I	8.6
C13:0	2.6
C15:1ω8c	2.5
C17:0	2.5
C16:0	2.1
C16:1ω6c / C16:1ω7c	1.4
C18:1ω9c	1.3
C14:0	1
C15:1ω6c	0.7
C16:1ω9c	0.6
C17:1ω6c	0

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42915]	Sample type/isolated from	faeces of a primate (Rhinopithecus roxellanae)
[Ref.: #42915]	Host species	Rhinopithecus roxellanae
[Ref.: #42915]	Geographic location (country and/or sea, region)	Yunnan province, Yunnan Wild Animal Park
[Ref.: #42915]	Country	China
[Ref.: #42915]	Country ISO 3 Code	CHN
[Ref.: #42915]	Continent	Asia

[Ref.: #43282]	Sample type/isolated from	faeces sample of a primate (Rhinopithecus roxellanae)
[Ref.: #43282]	Geographic location (country and/or sea, region)	Yunnan Wild Animal Park in Yunnan province, south-western China
[Ref.: #43282]	Country	China
[Ref.: #43282]	Country ISO 3 Code	CHN
[Ref.: #43282]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Faeces of a primate (Rhinopithecus roxellanae) living in Yunnan Wild Animal Park in Yunnan Province
[Ref.: #67770]	Host species	Rhinopithecus roxellanae
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Primates
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

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Global distribution of 16S sequence KX214304 (>99% sequence identity) for Mobilicoccus caccae subclade from Microbeatlas

Aquatic Samples	300
Soil Samples	48
Animal Samples	937
Plant Samples	38
Total Samples	1323

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42915]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42915]	Mobilicoccus caccae strain YIM 101593 16S ribosomal RNA gene, partial sequence	KX214304	1512	ENA	1859295 tax ID

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GC-content

69.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

DSM 27611, CCTCC AB 2013229, YIM 101593, JCM 33578, NBRC 113072

[Ref.: #96613]

SI-ID 404542

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Agilicoccus flavus gen. nov., sp. nov., a novel member of the family Dermatophilaceae isolated from the Pearl River.	Yin LZ, Liu ZT, Li JL, Wang PD, Dong L, Duan L, Luo XQ, Fang BZ, Li WJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.005076	2021	*
Phylogeny	Mobilicoccus caccae sp. nov., isolated from the faeces of the primate Rhinopithecus roxellanae.	Chen X, Li QY, Li GD, Xu FJ, Jiang CL, Han L, Huang XS, Jiang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.001939	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42915

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27611

#43282

Xiu Chen, Qin-Yuan Li, Gui-Ding Li, Fang-Ji Xu, Cheng-Lin Jiang, Li Han, Xue-Shi Huang and Yi Jiang: Mobilicoccus caccae sp. nov., isolated from the faeces of the primate Rhinopithecus roxellanae. IJSEM 67: 2253 - 2257 2017 ( DOI 10.1099/ijsem.0.001939 , PubMed 28671530 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96613

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404542.1 )

* These data were automatically processed and therefore are not curated

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