Name: Vitiosangium subalbum MCy10944
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140282

Type strain:

Species: Vitiosangium subalbum

Strain Designation: MCy10944

Culture col. no.: DSM 102953, NCCB 100601

Strain history: <- R.P. Awal, Helmholtz Institute for Pharmaceutical Research, Saarbrücken, Germany; MCy10944

NCBI tax ID(s): 1867797 (species)

SI-ID 407104

DSM 102953

Section

Vitiosangium subalbum MCy10944 is an aerobe, chemoheterotroph, spore-forming bacterium that was isolated from soil sample provided by National College, Tribhuvan University, Nepal.

rod-shaped
spore-forming
aerobe
chemoheterotroph
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Myxococcales*
	Family	*Archangiaceae*
	Genus	*Vitiosangium*
	Species	**Vitiosangium subalbum**
	Full Scientific Name (LPSN)	Vitiosangium subalbum Awal et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43219]	Cell length	6.0-16.0 µm

[Ref.: #43219]	Cell width	0.8-1.0 µm

[Ref.: #43219]	Cell shape	rod-shaped

[Ref.: #43219]	Colony color	smoky whitish
[Ref.: #43219]	Cultivation medium used	buffered VY/2 agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42889]

Culture medium

AMB MEDIUM FOR RACEMICYSTIS (DSMZ Medium 1614)

[Ref.: #42889]

Culture medium growth

[Ref.: #42889]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42889]

Culture medium composition

expand / minimize

[Ref.: #42889]

Culture medium

VY/2 AGAR (DSMZ Medium 9)

[Ref.: #42889]

Culture medium growth

[Ref.: #42889]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42889]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42889]			growth	28 °C
[Ref.: #43219]			growth	18-37 °C

[Ref.: #42889]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #43219]			optimum	7
[Ref.: #43219]			growth	5.5-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43219]

Oxygen tolerance

aerobe

[Ref.: #43219]

Nutrition type

chemoheterotroph

[Ref.: #43219]	Spore description	Oval to short rods
[Ref.: #43219]	Type of spore	myxospore
[Ref.: #43219]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43219]		NaCl		maximum	0.5	%(w/v)

[Ref.: #43219]

Observation

Lyses E. coli, M. luteus and H. anomala

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43219]	arabinose ChEBI	+	growth
[Ref.: #43219]	casein	+	hydrolysis
[Ref.: #43219]	meat extract	+	growth
[Ref.: #43219]	milk	+	hydrolysis
[Ref.: #43219]	peptone	+	growth
[Ref.: #43219]	polypeptone	+	growth
[Ref.: #43219]	starch ChEBI	+	hydrolysis
[Ref.: #43219]	starch ChEBI	+	growth
[Ref.: #43219]	tryptone	+	growth
[Ref.: #43219]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43219]	tween 80 ChEBI	+	hydrolysis
[Ref.: #43219]	xylan ChEBI	+	hydrolysis
[Ref.: #43219]	yeast extract	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43219]	ampicillin ChEBI				yes	50	µg/mL
[Ref.: #43219]	bacitracin ChEBI	yes	50	µg/mL
[Ref.: #43219]	cephalothin ChEBI	yes	50	µg/mL
[Ref.: #43219]	fusidate ChEBI	yes
[Ref.: #43219]	gentamicin ChEBI				yes		µg/mL
[Ref.: #43219]	hygromycin ChEBI				yes	50	µg/mL
[Ref.: #43219]	kanamycin ChEBI				yes	50	µg/mL
[Ref.: #43219]	kasugamycin ChEBI	yes	50	µg/mL
[Ref.: #43219]	neomycin ChEBI				yes		µg/mL
[Ref.: #43219]	oxytetracycline ChEBI	yes
[Ref.: #43219]	spectinomycin ChEBI	yes	50	µg/mL
[Ref.: #43219]	thiostrepton ChEBI	yes
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43219]	acid phosphatase	+	3.1.3.2
[Ref.: #43219]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43219]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #43219]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43219]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43219]	alpha-glucosidase	+/-	3.2.1.20
[Ref.: #43219]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43219]	beta-galactosidase	+/-	3.2.1.23
[Ref.: #43219]	beta-glucosidase	+/-	3.2.1.21
[Ref.: #43219]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43219]	cystine arylamidase	+	3.4.11.3
[Ref.: #43219]	esterase (C 4)	+
[Ref.: #43219]	esterase Lipase (C 8)	+
[Ref.: #43219]	leucine arylamidase	+	3.4.11.1
[Ref.: #43219]	lipase (C 14)	-
[Ref.: #43219]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43219]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43219]	trypsin	-	3.4.21.4
[Ref.: #43219]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43219]

Fatty acid	Percentage
C17:0 iso 2OH	26.6
C15:0 iso	20.3
C16:1	11.3
C17:0 iso	8.3
iso-C15:0 DMA	5.8
C16:0	5.5
C16:0 iso	5.1
iso-C15:0 OAG	4.4
C15:0 iso 3OH	2.7
C17:1 iso	2.4
C16:0 2OH	1.6
C14:0	1
C18:1ω9c	0.9
C18:0	0.6
C13:0 iso	0.5
C14:0 iso	0.5
C14:1	0.5
C15:0	0.4
C16:1 DMA	0.2
C10:0	0.2
C14:0 3OH	0.2
C11:0 iso	0.2
C15:1 iso	0.1
C16:0 3OH	0.1
iso-C17:0 OAG	0.1
C16:0 OAG	0.1
C16:2	0.1
iso-C18:0 2-OH	0.1
C16:0 iso 2OH	0.1
iso-C16:0 OAG	0.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42889]	Sample type/isolated from	soil sample provided by National College, Tribhuvan University, Nepal
[Ref.: #42889]	Country	Nepal
[Ref.: #42889]	Country ISO 3 Code	NPL
[Ref.: #42889]	Continent	Asia

[Ref.: #43219]	Sample type/isolated from	Nepalese soil sample
[Ref.: #43219]	Country	Nepal
[Ref.: #43219]	Country ISO 3 Code	NPL
[Ref.: #43219]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX430041 (>99% sequence identity) for Vitiosangium subalbum from Microbeatlas

Aquatic Samples	130
Soil Samples	1650
Animal Samples	83
Plant Samples	328
Total Samples	2191

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42889]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42889]	Vitiosangium subalbum strain MCy10944 16S ribosomal RNA gene, partial sequence	KX430041	1528	ENA	1867797 tax ID

[Ref.: #42889]

GC-content

74.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #42889]

Culture collection no.

DSM 102953, NCCB 100601

[Ref.: #96588]

SI-ID 407104

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Vitiosangium cumulatum gen. nov., sp. nov. and Vitiosangium subalbum sp. nov., soil myxobacteria, and emended descriptions of the genera Archangium and Angiococcus, and of the family Cystobacteraceae.	Awal RP, Garcia R, Gemperlein K, Wink J, Kunwar B, Parajuli N, Muller R	Int J Syst Evol Microbiol	10.1099/ijsem.0.001829	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42889

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102953

#43219

Ram Prasad Awal, Ronald Garcia, Katja Gemperlein, Joachim Wink, Bikram Kunwar, Niranjan Parajuli and Rolf Müller: Vitiosangium cumulatum gen. nov., sp. nov. and Vitiosangium subalbum sp. nov., soil myxobacteria, and emended descriptions of the genera Archangium and Angiococcus, and of the family Cystobacteraceae. IJSEM 67: 1422 - 1430 2017 ( DOI 10.1099/ijsem.0.001829 , PubMed 28141508 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96588

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407104.1 )

* These data were automatically processed and therefore are not curated

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