Name: Streptococcus caviae DSM 102819
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140263

Type strain:

Species: Streptococcus caviae

Culture col. no.: DSM 102819, TISTR 2371, Cavy grass 6

Strain history: <- S. Palakawong Na Ayudthaya, Wageningen University; Cavy grass 6

NCBI tax ID(s): 1930533 (species)

SI-ID 402107

DSM 102819

Section

Streptococcus caviae DSM 102819 is a facultative anaerobe, mesophilic, Gram-positive bacterium that forms circular colonies and was isolated from faeces of guinea pigs .

coccus-shaped
colony-forming
Gram-positive
facultative anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Streptococcaceae*
	Genus	*Streptococcus*
	Species	**Streptococcus caviae**
	Full Scientific Name (LPSN)	Streptococcus caviae Palakawong Na Ayudthaya et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43214]	Gram stain	positive

[Ref.: #43214]	Cell length	0.5-0.8 µm

[Ref.: #43214]	Cell width	0.5 µm

[Ref.: #43214]	Cell shape	coccus-shaped
[Ref.: #43214]	Cell shape	oval-shaped

[Ref.: #43214]	Motility	no

[Ref.: #43214]	Colony size	1-2 mm
[Ref.: #43214]	Colony color	white
[Ref.: #43214]	Colony shape	circular
[Ref.: #43214]	Incubation period	2 days
[Ref.: #43214]	Cultivation medium used	RCM (Reinforced Clostridial Medium)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43214]

Culture medium

RCM (Reinforced Clostridial Medium)

[Ref.: #43214]

Culture medium growth

[Ref.: #42870]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #42870]

Culture medium growth

[Ref.: #42870]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42870]

Culture medium composition

expand / minimize

[Ref.: #42870]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #42870]

Culture medium growth

[Ref.: #42870]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42870]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #42870]	growth	37 °C
[Ref.: #43214]	optimum	37 °C
[Ref.: #43214]	growth	25-40 °C

[Ref.: #42870]	Temperature range	mesophilic
[Ref.: #43214]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43214]			optimum	8
[Ref.: #43214]			growth	4.5-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43214]

Oxygen tolerance

facultative anaerobe

[Ref.: #43214]	Type of spore	spore
[Ref.: #43214]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43214]		NaCl		growth	0-4.5	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	amygdalin ChEBI	+	builds acid from
[Ref.: #43214]	arbutin ChEBI	+	builds acid from
[Ref.: #68381]	arginine ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #43214]	carboxymethylcellulose ChEBI	-	fermentation
[Ref.: #43214]	cellobiose ChEBI	+	fermentation
[Ref.: #43214]	cellobiose ChEBI	-	fermentation
[Ref.: #43214]	cellulose ChEBI	-	fermentation
[Ref.: #43214]	D-arabinose ChEBI	-	fermentation
[Ref.: #43214]	D-arabitol ChEBI	+	fermentation
[Ref.: #43214]	D-arabitol ChEBI	+	builds acid from
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	D-fructose ChEBI	+	fermentation
[Ref.: #43214]	D-fructose ChEBI	+	builds acid from
[Ref.: #43214]	D-galactose ChEBI	+	fermentation
[Ref.: #43214]	D-mannitol ChEBI	+	fermentation
[Ref.: #68381]	D-mannitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	D-mannose ChEBI	+	fermentation
[Ref.: #43214]	D-ribose ChEBI	-	fermentation
[Ref.: #68381]	D-ribose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	D-sorbitol ChEBI	+	fermentation
[Ref.: #43214]	D-sorbitol ChEBI	+	builds acid from
[Ref.: #43214]	D-tagatose ChEBI	+	builds acid from
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	D-xylose ChEBI	-	fermentation
[Ref.: #43214]	dried grass extract	+	fermentation
[Ref.: #43214]	esculin ferric citrate	+	builds acid from
[Ref.: #43214]	galactitol ChEBI	+	fermentation
[Ref.: #43214]	galactitol ChEBI	+	builds acid from
[Ref.: #43214]	gentiobiose ChEBI	+	builds acid from
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	hippurate ChEBI	+/-	hydrolysis
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #43214]	inulin ChEBI	+	fermentation
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	L-arabitol ChEBI	-	fermentation
[Ref.: #43214]	L-sorbose ChEBI	+	fermentation
[Ref.: #43214]	lactate ChEBI	-	fermentation
[Ref.: #43214]	lactose ChEBI	+	builds acid from
[Ref.: #68381]	lactose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	laminarin ChEBI	-	fermentation
[Ref.: #43214]	lignin ChEBI	-	fermentation
[Ref.: #43214]	maltose ChEBI	+	fermentation
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	melezitose ChEBI	+	assimilation
[Ref.: #68381]	melezitose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	melibiose ChEBI	+	builds acid from
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	methyl alpha-D-mannoside ChEBI	-	fermentation
[Ref.: #43214]	methyl beta-D-glucopyranoside ChEBI	+	assimilation
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #43214]	pectin ChEBI	-	fermentation
[Ref.: #43214]	potassium gluconate ChEBI	+	builds acid from
[Ref.: #43214]	potassium gluconate ChEBI	+	fermentation
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #43214]	raffinose ChEBI	+	fermentation
[Ref.: #68381]	raffinose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	salicin ChEBI	+	builds acid from
[Ref.: #68381]	sorbitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	starch ChEBI	-	fermentation
[Ref.: #43214]	sucrose ChEBI	+	fermentation
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #43214]	trehalose ChEBI	+	fermentation
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #43214]	xylan ChEBI	-	fermentation
[Ref.: #43214]	xylitol ChEBI	-	fermentation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43214]		acetoin ChEBI	yes
[Ref.: #68381]		acetoin ChEBI	yes	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #43214]		acetoin ChEBI	+
[Ref.: #68381]		acetoin ChEBI	+	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #43214]	acid phosphatase	+	3.1.3.2
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	+		* from API rID32STR
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR
[Ref.: #43214]	alpha-galactosidase	+	3.2.1.22
[Ref.: #43214]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43214]	arginine dihydrolase	+	3.5.3.6
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR
[Ref.: #68381]	beta-galactosidase	-	3.2.1.23	* from API rID32STR
[Ref.: #43214]	beta-glucosidase	+	3.2.1.21
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68381]	beta-glucuronidase	-	3.2.1.31	* from API rID32STR
[Ref.: #43214]	beta-mannosidase	+/-	3.2.1.25
[Ref.: #68381]	beta-mannosidase	-	3.2.1.25	* from API rID32STR
[Ref.: #43214]	catalase	-	1.11.1.6
[Ref.: #43214]	cystine arylamidase	+	3.4.11.3
[Ref.: #43214]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43214]	esterase (C 4)	+
[Ref.: #43214]	esterase Lipase (C 8)	+
[Ref.: #68381]	glycyl tryptophan arylamidase	-		* from API rID32STR
[Ref.: #43214]	leucine arylamidase	+	3.4.11.1
[Ref.: #43214]	lipase (C 14)	+
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR
[Ref.: #43214]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #68381]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32STR
[Ref.: #43214]	tripeptide aminopeptidase	+	3.4.11.4
[Ref.: #43214]	urease	+	3.5.1.5
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
[Ref.: #43214]	valine arylamidase	+/-
	Only first 10 entries are displayed. Click here to see all.

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #42870]	10835	-	+	-	-	+/-	-	-	+	+	+	+	+	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	-	+	-	-	-
[Ref.: #42870]	10753	-	+	-	-	-	-	-	+	+	+	+	+	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	-	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42870]	Sample type/isolated from	faeces of guinea pigs (Cavia porcellus)
[Ref.: #42870]	Host species	Cavia porcellus
[Ref.: #42870]	Country	Netherlands
[Ref.: #42870]	Country ISO 3 Code	NLD
[Ref.: #42870]	Continent	Europe
[Ref.: #42870]	Geographic location	51.9671°/5.6586°

[Ref.: #43214]	Sample type/isolated from	faecal samples of guinea pigs
[Ref.: #43214]	Geographic location (country and/or sea, region)	Ede, The Netherlands
[Ref.: #43214]	Country	Netherlands
[Ref.: #43214]	Country ISO 3 Code	NLD
[Ref.: #43214]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Rodentia (Other)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42870]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42870]	Streptococcus caviae partial 16S rRNA gene, strain Cavy grass 6	LT546457	1412	ENA	1930533 tax ID

[Ref.: #42870]

GC-content

42.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #42870]

Culture collection no.

DSM 102819, TISTR 2371, Cavy grass 6

[Ref.: #96569]

SI-ID 402107

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequence of Streptococcus caviae Strain Cavy grass 6(T), Isolated from Domesticated Guinea Pig Fecal Samples.	Palakawong Na Ayudthaya S, Marshall IP, Schreiber L, Plugge CM	Genome Announc	10.1128/genomeA.00080-17	2017	*
Phylogeny	Streptococcus caviae sp. nov., isolated from guinea pig faecal samples.	Palakawong Na Ayudthaya S, Hilderink LJ, Oost JV, Vos WM, Plugge CM	Int J Syst Evol Microbiol	10.1099/ijsem.0.001758	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42870

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102819

#43214

Susakul Palakawong Na Ayudthaya, Loes J. Hilderink, John van der Oost, Willem M. de Vos and Caroline M. Plugge: Streptococcus caviae sp. nov., isolated from guinea pig faecal samples. IJSEM 67: 1551 - 1556 2017 ( DOI 10.1099/ijsem.0.001758 , PubMed 28008820 )

#68381

Automatically annotated from API rID32STR .

#96569

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402107.1 )

* These data were automatically processed and therefore are not curated

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