Name: Helicobacter ailurogastricus ASB7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140259

Type strain:

Species: Helicobacter ailurogastricus

Strain Designation: ASB7

Culture col. no.: DSM 100489, LMG 28648

Strain history: <- M. Joosten, Univ. Ghent, Belgium; ASB7 <- Fac. Veterinary Medicine, Univ. Ghent, Merelbeke, Belgium

NCBI tax ID(s): 1578720 (species)

SI-ID 404221

DSM 100489

Other strains from Helicobacter ailurogastricus

H. ailurogastricus ASB11, DSM 29989

Section

Helicobacter ailurogastricus ASB7 is a mesophilic, motile bacterium that was isolated from gastric mucosae of a stray cat.

motile
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Helicobacteraceae*
	Genus	*Helicobacter*
	Species	**Helicobacter ailurogastricus**
	Full Scientific Name (LPSN)	Helicobacter ailurogastricus Joosten et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.999

[Ref.: #69480]	Motility	yes Confidence in %94.325

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42866]

Culture medium

HELICOBACTER MEDIUM (DSMZ Medium 1279)

[Ref.: #42866]

Culture medium growth

[Ref.: #42866]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42866]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42866]			growth	37 °C

[Ref.: #42866]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42866]	Sample type/isolated from	gastric mucosae of a stray cat
[Ref.: #42866]	Geographic location (country and/or sea, region)	Merelbeke
[Ref.: #42866]	Country	Belgium
[Ref.: #42866]	Country ISO 3 Code	BEL
[Ref.: #42866]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Felidae (Cat)
#Host Body-Site	#Gastrointestinal tract	-
#Infection	#Disease	#Mycosis

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Helicobacter ailurogastricus ASB7	GCA_001282945	scaffold	GenBank	1578720 tax ID	*

[Ref.: #42866]

GC-content

37.34 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Helicobacter ailurogastricus ASB7 NCBI: GCA_001282945.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Helicobacter ailurogastricus ASB7 NCBI: GCA_001282945.1
[Ref.: #69480]	motile	yes	89.694	no
[Ref.: #69480]	flagellated	no	62.4	no
[Ref.: #69480]	gram-positive	no	99.263	no
[Ref.: #69480]	anaerobic	no	89.823	no
[Ref.: #69480]	halophile	no	86.242	no
[Ref.: #69480]	spore-forming	no	96.743	no
[Ref.: #69480]	glucose-util	no	64.565	no
[Ref.: #69480]	aerobic	no	95.964	no
[Ref.: #69480]	thermophile	no	50	yes
[Ref.: #69480]	glucose-ferment	no	80.773	no

Availability in culture collections External links

[Ref.: #42866]

Culture collection no.

DSM 100489, LMG 28648

[Ref.: #96566]

SI-ID 404221

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42866

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100489

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96566

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404221.1 )

* These data were automatically processed and therefore are not curated

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