Name: Helicobacter ailurogastricus ASB11
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140258

Type strain:

Species: Helicobacter ailurogastricus

Strain Designation: ASB11

Culture col. no.: DSM 29989

Strain history: <- M. Joosten, Univ. Ghent, Belgium; ASB11 <- Fac. Veterinary Medicine, Univ. Ghent

NCBI tax ID(s): 1578720 (species)

SI-ID 404357

DSM 29989

Other strains from Helicobacter ailurogastricus

H. ailurogastricus ASB7, DSM 100489, LMG 28648 (type strain)

Section

Helicobacter ailurogastricus ASB11 is a mesophilic bacterium that was isolated from gastric mucosa of stray cat.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Helicobacteraceae*
	Genus	*Helicobacter*
	Species	**Helicobacter ailurogastricus**
	Full Scientific Name (LPSN)	Helicobacter ailurogastricus Joosten et al. 2017

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42865]

Culture medium

HELICOBACTER MEDIUM (DSMZ Medium 1279)

[Ref.: #42865]

Culture medium growth

[Ref.: #42865]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42865]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42865]			growth	37 °C

[Ref.: #42865]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42865]	Sample type/isolated from	gastric mucosa of stray cat
[Ref.: #42865]	Geographic location (country and/or sea, region)	Merelbeke
[Ref.: #42865]	Country	Belgium
[Ref.: #42865]	Country ISO 3 Code	BEL
[Ref.: #42865]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Felidae (Cat)
#Host Body-Site	#Gastrointestinal tract	-
#Infection	#Disease	#Mycosis

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Helicobacter ailurogastricus ASB11	GCA_001283025	scaffold	GenBank	1578720 tax ID	*

[Ref.: #42865]

GC-content

37.38 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Helicobacter ailurogastricus ASB11 NCBI: GCA_001283025.1
[Ref.: #69480]	motile	yes	89.681	no
[Ref.: #69480]	flagellated	no	62.089	no
[Ref.: #69480]	gram-positive	no	99.276	no
[Ref.: #69480]	anaerobic	no	89.154	no
[Ref.: #69480]	aerobic	no	96.471	no
[Ref.: #69480]	halophile	no	85.704	no
[Ref.: #69480]	spore-forming	no	96.83	no
[Ref.: #69480]	glucose-util	no	66.297	no
[Ref.: #69480]	thermophile	no	56.139	no
[Ref.: #69480]	glucose-ferment	no	81.733	no

Availability in culture collections External links

[Ref.: #42865]

Culture collection no.

DSM 29989

[Ref.: #96565]

SI-ID 404357

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42865

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29989

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#96565

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404357.1 )

* These data were automatically processed and therefore are not curated

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