Streptococcus pantholopis TA 26, TA26 | Type strain | DSM 102135, CGMCC 1.15667

Strain identifier

BacDive ID: 140230

Type strain:

Species: Streptococcus pantholopis

Strain Designation: TA 26, TA26

Culture col. no.: DSM 102135, CGMCC 1.15667

Strain history: <- X. Bai, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China; TA26

Section

Name and taxonomic classification
Morphology
Culture and growth conditions
Physiology and metabolism
Isolation, sampling and environmental information
Safety information
Sequence information

External links

Streptococcus pantholopis TA 26 is a facultative anaerobe, psychrophilic, gram-positive bacterium that was isolated from fresh faeces of a Tibetan antelope .

coccus-shaped
gram-positive
facultative anaerobe
psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Firmicutes
	Class	Bacilli
	Order	Lactobacillales
	Family	Streptococcaceae
	Genus	Streptococcus
	Species	Streptococcus pantholopis
	Full Scientific Name (PNU)	Streptococcus pantholopis Bai et al. 2016

Information on morphological and physiological propertiesMorphology

[Ref.: #43135]	Gram stain	positive
[Ref.: #43135]	Cell width	0.4-0.7 µm
[Ref.: #43135]	Cell shape	coccus-shaped
[Ref.: #43135]	Motility	no

[Ref.: #43135]	Type of hemolysis	alpha
[Ref.: #43135]	Colony size	0.75-1.00 mm
[Ref.: #43135]	Incubation period	2 days
[Ref.: #43135]	Cultivation medium used	Blood agar

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #43135]

Culture medium

Blood agar

[Ref.: #43135]

Culture medium growth

[Ref.: #42837]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693), microaerophilic

[Ref.: #42837]

Culture medium growth

[Ref.: #42837]

Culture medium link

medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #42837]		growth	37 ̊C
[Ref.: #43135]	no	growth	15 ̊C
[Ref.: #43135]	no	growth	4 ̊C
[Ref.: #43135]		growth	42 ̊C
[Ref.: #43135]		growth	37 ̊C
[Ref.: #43135]		growth	30 ̊C
[Ref.: #43135]		growth	22 ̊C

[Ref.: #42837]	Temperature range	mesophilic
[Ref.: #43135]	Temperature range	psychrophilic
[Ref.: #43135]	Temperature range	thermophilic
[Ref.: #43135]	Temperature range	mesophilic
[Ref.: #43135]	Temperature range	psychrophilic

Information on physiology and metabolismPhysiology and metabolism

[Ref.: #43135]

Oxygen tolerance

facultative anaerobe

[Ref.: #43135]	Type of spore	spore
[Ref.: #43135]	Ability of spore formation	no

	Salt	Tested relation		Salt conc.
[Ref.: #43135]	NaCl		growth	3.5	%(w/v)
[Ref.: #43135]	NaCl	no	growth	4.5	%(w/v)
[Ref.: #43135]	NaCl	no	growth	6.5	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43135]	2-oxogluconate	-	builds acid from
[Ref.: #43135]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #43135]	amygdalin ChEBI	+	builds acid from
[Ref.: #43135]	arbutin ChEBI	+	builds acid from
[Ref.: #43135]	arginine ChEBI	-	hydrolysis
[Ref.: #43135]	cellobiose ChEBI	+	builds acid from
[Ref.: #43135]	D-arabinose ChEBI	-	builds acid from
[Ref.: #43135]	D-arabitol ChEBI	-	builds acid from
[Ref.: #43135]	D-fructose ChEBI	+	builds acid from
[Ref.: #43135]	D-fucose ChEBI	-	builds acid from
[Ref.: #43135]	D-galactose ChEBI	+	builds acid from
[Ref.: #43135]	D-glucose ChEBI	+	builds acid from
[Ref.: #43135]	D-lyxose ChEBI	-	builds acid from
[Ref.: #43135]	D-mannose ChEBI	+	builds acid from
[Ref.: #43135]	D-ribose ChEBI	-	builds acid from
[Ref.: #43135]	D-tagatose ChEBI	+	builds acid from
[Ref.: #43135]	D-xylose ChEBI	-	builds acid from
[Ref.: #43135]	erythritol ChEBI	-	builds acid from
[Ref.: #43135]	esculin ChEBI	+	hydrolysis
[Ref.: #43135]	galactitol ChEBI	-	builds acid from
[Ref.: #43135]	gentiobiose ChEBI	+	builds acid from
[Ref.: #43135]	gluconate ChEBI	-	builds acid from
[Ref.: #43135]	glycerol ChEBI	-	builds acid from
[Ref.: #43135]	glycogen ChEBI	-	builds acid from
[Ref.: #43135]	hippurate ChEBI	+	hydrolysis
[Ref.: #43135]	inulin ChEBI	-	builds acid from
[Ref.: #43135]	inulin ChEBI	-	fermentation
[Ref.: #43135]	L-arabinose ChEBI	-	builds acid from
[Ref.: #43135]	L-arabitol ChEBI	-	builds acid from
[Ref.: #43135]	L-fucose ChEBI	-	builds acid from
[Ref.: #43135]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #43135]	L-xylose ChEBI	-	builds acid from
[Ref.: #43135]	lactose ChEBI	+	builds acid from
[Ref.: #43135]	lactose ChEBI	+	fermentation
[Ref.: #43135]	maltose ChEBI	+	builds acid from
[Ref.: #43135]	maltose ChEBI	+	fermentation
[Ref.: #43135]	mannitol ChEBI	+	builds acid from
[Ref.: #43135]	mannitol ChEBI	+	fermentation
[Ref.: #43135]	melezitose ChEBI	-	builds acid from
[Ref.: #43135]	melibiose ChEBI	-	builds acid from
[Ref.: #43135]	melibiose ChEBI	-	fermentation
[Ref.: #43135]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #43135]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #43135]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #43135]	myo-inositol ChEBI	-	builds acid from
[Ref.: #43135]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #43135]	raffinose ChEBI	-	builds acid from
[Ref.: #43135]	raffinose ChEBI	-	fermentation
[Ref.: #43135]	ribitol ChEBI	-	builds acid from
[Ref.: #43135]	salicin ChEBI	+	builds acid from
[Ref.: #43135]	sorbitol ChEBI	+	builds acid from
[Ref.: #43135]	sorbitol ChEBI	+	fermentation
[Ref.: #43135]	starch ChEBI	-	builds acid from
[Ref.: #43135]	sucrose ChEBI	+	builds acid from
[Ref.: #43135]	trehalose ChEBI	+	builds acid from
[Ref.: #43135]	trehalose ChEBI	+	fermentation
[Ref.: #43135]	turanose ChEBI	-	builds acid from
[Ref.: #43135]	urea ChEBI	+	hydrolysis
[Ref.: #43135]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43135]		acetoin ChEBI	yes

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #43135]		acetoin ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #43135]	acid phosphatase	-	3.1.3.2
[Ref.: #43135]	alkaline phosphatase	-	3.1.3.1
[Ref.: #43135]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43135]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43135]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43135]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43135]	beta-D-fucosidase	-	3.2.1.38
[Ref.: #43135]	beta-galactosidase	-	3.2.1.23
[Ref.: #43135]	beta-glucosidase	+	3.2.1.21
[Ref.: #43135]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43135]	catalase	-	1.11.1.6
[Ref.: #43135]	cystine arylamidase	-	3.4.11.3
[Ref.: #43135]	esterase (C 4)	-
[Ref.: #43135]	esterase Lipase (C 8)	-
[Ref.: #43135]	leucine arylamidase	+	3.4.11.1
[Ref.: #43135]	lipase (C 14)	-
[Ref.: #43135]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43135]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43135]	trypsin	-	3.4.21.4
[Ref.: #43135]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43135]

Fatty acid	Percentage
C16:0	32.09
C18:1ω9c	17.96
C14:0	12.97
C18:2ω6,9c / anteiso-C18:0	12.1
C18:1ω7c / C18:1ω6c	9.68
C18:0	7.31
C16:1ω9c	4.1
C16:1ω7c / C16:1ω6c	2.01
C17:0	1.07
C12:0	0.7

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #42837]	Sample type/isolated from	fresh faeces of a Tibetan antelope (Pantholops hodgsonii)
[Ref.: #42837]	Host species	Pantholops hodgsonii
[Ref.: #42837]	Geographic location (country and/or sea, region)	Qinghai, Hoh Xil Nat. Nature Reserve (35° 36' N 93° 44' E at an altitude of 4514.4 m )
[Ref.: #42837]	Country	China
[Ref.: #42837]	Country ISO 3 Code	CHN
[Ref.: #42837]	Continent	Asia
[Ref.: #42837]	Geographic location	35.6000°/93.7333°

[Ref.: #43135]	Sample type/isolated from	fresh faecal samples of two Tibetan antelopes
[Ref.: #43135]	Geographic location (country and/or sea, region)	Hoh Xil National Nature Reserve, Qinghai, China
[Ref.: #43135]	Country	China
[Ref.: #43135]	Country ISO 3 Code	CHN
[Ref.: #43135]	Continent	Asia
[Ref.: #43135]	Geographic location	35.0000°/93.0000°
[Ref.: #43135]	Isolation date	2014-05-13

Isolation sources categories

#Host	#Mammals	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

[Ref.: #42837]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42837]	Streptococcus pantholopis strain TA 26 16S ribosomal RNA gene, complete sequence	KU877326	1545	ENA	1811193 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptococcus pantholopis TA 26	GCA_001642085	complete	GenBank	1811193 tax ID	*
[Ref.: #66792]	Streptococcus sp. TA 26	1811193.3	complete	PATRIC	1811193 tax ID	*

[Ref.: #43135]	GC-content	42 mol%
[Ref.: #42837]	GC-content	42 mol%	sequence analysis

Availability in culture collectionsExternal links

[Ref.: #42837]

Culture collection no.

DSM 102135, CGMCC 1.15667

References

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#42837

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102135

#43135

Xiangning Bai, Yanwen Xiong, Shan Lu, Dong Jin, Xinhe Lai, Jing Yang, Lina Niu, Shoukui Hu, Xiangli Meng, Ji Pu, Changyun Ye and Jianguo Xu: Streptococcus pantholopis sp. nov., isolated from faeces of the Tibetan antelope (Pantholops hodgsonii). IJSEM 66: 3281 - 3286 2016 ( DOI 10.1099/ijsem.0.001189 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

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