Cite this strain

"Desnuesiella massiliensis" (DSM 101500, CSUR P1918, Mt10)

BacDive ID 140145

Type strain

Strain Designation Mt10

Culture col. no. DSM 101500 CSUR P1918 Mt10

NCBI tax ID(s) 1650662

Special Collections DSMZ Cadoret human gut

Links

"Desnuesiella massiliensis" Mt10 is a mesophilic prokaryote that was isolated from stool sample of a 1-year-old boy with kwashiorkor disease.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 407134

DSM 101500

@ref 20215

Last LPSN update 2025-12-16 10:03:31

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus "Desnuesiella"

Species "Desnuesiella massiliensis"

Full scientific name Desnuesiella massiliensis Hadjadj et al. 2016

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
42752	PY + X MEDIUM (DSMZ Medium 104b)		Medium recipe at MediaDive	Name: PY + X MEDIUM (DSMZ Medium 104b) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
42752	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	anaerobe	98.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Infection	#Patient	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
42752	stool sample of a 1-year-old boy with kwashiorkor disease	Senegal	SEN	Africa

Taxonmaps

69479

Global distribution of 16S sequence LN846906 (>99% sequence identity) for Desnuesiella massiliensis subclade from Microbeatlas

Aquatic Samples	230
Soil Samples	319
Animal Samples	508
Plant Samples	42
Total Samples	1099

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Desnusiella massiliensis assembly for Desnuesiella massiliensis mt10	scaffold	GCA_001403615	1650662.4	2775506843	1650662	65.31

Genome browser: GCA_001403615

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42752	Clostridiaceae bacterium mt10 partial 16S rRNA gene, strain mt10	LN846906	1465		1650662

GC content

@ref	GC-content (mol%)	Method
42752	32.09	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Desnuesiella massiliensis mt10
NCBI: GCA_001403615

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	85.90	no
125439	motility	BacteriaNetⓘ	yes	80.40	no
125439	gram_stain	BacteriaNetⓘ	positive	70.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Desnuesiella massiliensis mt10
NCBI: GCA_001403615.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	63.54	no
125438	anaerobic	anaerobicⓘ	yes	83.40	no
125438	aerobic	aerobicⓘ	no	91.96	no
125438	spore-forming	spore-formingⓘ	yes	84.10	no
125438	thermophilic	thermophileⓘ	no	90.12	yes
125438	flagellated	motile2+ⓘ	yes	78.07	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome sequence and description of Desnuesiella massiliensis gen. nov., sp. nov. a new member of family Clostridiaceae.	Hadjadj L, Tidjani Alou M, Sokhna C, Lagier JC, Raoult D, Rolain JM.	New Microbes New Infect	10.1016/j.nmni.2016.03.003	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42752	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101500
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Desnuesiella massiliensis" (DSM 101500, CSUR P1918, Mt10)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_001403615

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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