Name: Desnuesiella massiliensis Mt10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140145

Type strain:

Species: Desnuesiella massiliensis

Strain Designation: Mt10

Culture col. no.: DSM 101500, CSUR P1918

Strain history: <- S. Khelaifia, Timone Hospital, Marseille, France; Mt10 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes {2015}

NCBI tax ID(s): 1650662 (species)

Section

Desnuesiella massiliensis Mt10 is an anaerobe, spore-forming, mesophilic bacterium that was isolated from stool sample of a 1-year-old boy with kwashiorkor disease.

motile
spore-forming
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	"Desnuesiella"
	Species	"Desnuesiella massiliensis"
	Full Scientific Name (LPSN)	Desnuesiella massiliensis Hadjadj et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %91.571

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42752]

Culture medium

PY + X MEDIUM (DSMZ Medium 104b)

[Ref.: #42752]

Culture medium growth

[Ref.: #42752]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42752]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42752]			growth	37 °C

[Ref.: #42752]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %98.651

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42752]	Sample type/isolated from	stool sample of a 1-year-old boy with kwashiorkor disease
[Ref.: #42752]	Country	Senegal
[Ref.: #42752]	Country ISO 3 Code	SEN
[Ref.: #42752]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Infection	#Patient	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LN846906 (>99% sequence identity) for Desnuesiella massiliensis subclade from Microbeatlas

Aquatic Samples	230
Soil Samples	319
Animal Samples	508
Plant Samples	42
Total Samples	1099

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42752]	Clostridiaceae bacterium mt10 partial 16S rRNA gene, strain mt10	LN846906	1465	ENA	1650662 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Desnuesiella massiliensis mt10	GCA_001403615	scaffold	GenBank	1650662 tax ID	*

[Ref.: #42752]

GC-content

32.09 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Desnuesiella massiliensis mt10 NCBI: GCA_001403615.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Desnuesiella massiliensis mt10 NCBI: GCA_001403615.1
[Ref.: #69480]	flagellated	no	50	no
[Ref.: #69480]	gram-positive	yes	75.43	no
[Ref.: #69480]	anaerobic	yes	97.457	no
[Ref.: #69480]	aerobic	no	96.79	no
[Ref.: #69480]	halophile	no	93.869	no
[Ref.: #69480]	spore-forming	yes	94.263	no
[Ref.: #69480]	glucose-util	yes	89.798	no
[Ref.: #69480]	thermophile	no	99.047	yes
[Ref.: #69480]	motile	yes	80.722	no
[Ref.: #69480]	glucose-ferment	yes	58.56	no

Availability in culture collections External links

[Ref.: #42752]

Culture collection no.

DSM 101500, CSUR P1918

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42752

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101500

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Desnuesiella massiliensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Desnuesiella massiliensis mt10

Desnuesiella massiliensis mt10

Change proposal

Change proposal