Deinococcus carri (DSM 105435, KACC 17965, NBRC 110142)

Name: Deinococcus carri (DSM 105435, KACC 17965, NBRC 110142)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140103

Type strain

Strain Designation MA1003

Culture col. no. DSM 105435 KACC 17965 NBRC 110142 MA1003

NCBI tax ID(s) 1211323

Special Collections DSMZ

Links

Deinococcus carri MA1003 is a mesophilic prokaryote that was isolated from car, air-conditioning system .

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398094

NBRC 110142,DSM 105435

@ref 20215

Last LPSN update 2025-12-16 10:03:30

Domain Thermotogati

Phylum Deinococcota

Class Deinococci

Order Deinococcales

Family Deinococcaceae

Genus Deinococcus

Species Deinococcus carri

Full scientific name Deinococcus carri Kim et al. 2015

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
42710	GLYCEROL-YEAST EXTRACT-PEPTONE MEDIUM (DSMZ Medium 1484)		Medium recipe at MediaDive	Name: Glycerol-Yeast extract-Peptone Medium (DSMZ Medium 1484) Composition: Agar 15.0 g/l Yeast extract 5.0 g/l Bacto peptone 3.0 g/l Betaine 1.25 g/l Sodium pyruvate 1.25 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l MnSO4 x H2O 0.005 g/l ZnSO4 x 7 H2O 0.0018 g/l CoSO4 x 7 H2O 0.0018 g/l FeSO4 x 7 H2O 0.001 g/l CaCl2 x 2 H2O 0.001 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l Pyridoxine hydrochloride 0.0001 g/l Na2MoO4 x 2 H2O 0.0001 g/l H3BO3 0.0001 g/l CuSO4 x 5 H2O 0.0001 g/l (DL)-alpha-Lipoic acid 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Calcium D-(+)-pantothenate 5e-05 g/l Nicotinic acid 5e-05 g/l Riboflavin 5e-05 g/l Thiamine HCl 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l Vitamin B12 1e-06 g/l Glycerol Distilled water
42710	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
42710	positive	growth	28	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Engineered product
#Environmental	#Biofilm	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
42710	car, air-conditioning system (biofilm of the evaporator core)	Seoul	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence JX089327 (>99% sequence identity) for Deinococcus carri subclade from Microbeatlas

Aquatic Samples	481
Soil Samples	140
Animal Samples	555
Plant Samples	185
Total Samples	1361

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
42710	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3954505v1 assembly for Deinococcus carri NBRC 110142	contig	GCA_039545055	1211323	70.23

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42710	Deinococcus carri strain MA1003 16S ribosomal RNA gene, partial sequence	JX089327	1442		1211323

GC content

42710

GC-content (mol%)76.0

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Deinococcus metallilatus sp. nov. and Deinococcus carri sp. nov., isolated from a car air-conditioning system.	Kim DU, Lee H, Lee JH, Ahn JH, Lim S, Jeong S, Park SY, Seong CN, Ka JO	Int J Syst Evol Microbiol	10.1099/ijsem.0.000396	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42710	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105435
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Deinococcus carri (DSM 105435, KACC 17965, NBRC 110142)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039545055

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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