Name: Peribacillus huizhouensis GSS03
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140078

Type strain:

Species: Peribacillus huizhouensis

Strain Designation: GSS03

Culture col. no.: DSM 105481, CCTCC AB 2013237, KCTC 33172

Strain history: <- Korean Collection for Type Cultures, Biological Resources Center, Korea Institute of Bioscience and Biotechnology (KRIBB); KCTC 33172

NCBI tax ID(s): 1501239 (species)

SI-ID 400801

DSM 105481

Section

Peribacillus huizhouensis GSS03 is a spore-forming, mesophilic, motile bacterium that was isolated from soil sample, paddy field.

motile
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Peribacillus*
	Species	**Peribacillus huizhouensis**
	Full Scientific Name (LPSN)	Peribacillus huizhouensis (Li et al. 2014) Patel and Gupta 2020

Synonym

Bacillus huizhouensis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %98.083

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42685]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #42685]

Culture medium growth

[Ref.: #42685]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42685]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42685]			growth	30 °C

[Ref.: #42685]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42685]	Sample type/isolated from	soil sample, paddy field
[Ref.: #42685]	Geographic location (country and/or sea, region)	Huizhou, Guangdong province
[Ref.: #42685]	Country	China
[Ref.: #42685]	Country ISO 3 Code	CHN
[Ref.: #42685]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KJ464756 (>99% sequence identity) for Peribacillus from Microbeatlas

Aquatic Samples	207
Soil Samples	563
Animal Samples	1197
Plant Samples	102
Total Samples	2069

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42685]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42685]	Bacillus huizhouensis strain GSS03 16S ribosomal RNA gene, partial sequence	KJ464756	1460	ENA	1501239 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Peribacillus huizhouensis DSM 105481	GCA_014138605	scaffold	GenBank	1501239 tax ID	*
[Ref.: #66792]	Peribacillus huizhouensis strain DSM 105481	1501239.3	wgs	PATRIC	1501239 tax ID	*
[Ref.: #66792]	Bacillus huizhouensis DSM 105481	2861330777	draft	JGI IMG/M	1501239 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Peribacillus huizhouensis DSM 105481 NCBI: GCA_014138605.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Peribacillus huizhouensis DSM 105481 NCBI: GCA_014138605.1
[Ref.: #69480]	motile	yes	90.881	no
[Ref.: #69480]	flagellated	yes	88.543	no
[Ref.: #69480]	gram-positive	yes	90.35	no
[Ref.: #69480]	anaerobic	no	98.782	no
[Ref.: #69480]	aerobic	yes	91.667	no
[Ref.: #69480]	halophile	no	59.772	no
[Ref.: #69480]	spore-forming	yes	93.401	no
[Ref.: #69480]	glucose-util	yes	82.499	no
[Ref.: #69480]	thermophile	no	99.332	no
[Ref.: #69480]	glucose-ferment	no	87.24	no

Availability in culture collections External links

[Ref.: #42685]

Culture collection no.

DSM 105481, CCTCC AB 2013237, KCTC 33172

[Ref.: #96491]

SI-ID 400801

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus gossypii sp. nov., isolated from the stem of Gossypium hirsutum.	Kampfer P, Busse HJ, McInroy JA, Glaeser SP	Int J Syst Evol Microbiol	10.1099/ijsem.0.000555	2015	*
Phylogeny	Bacillus huizhouensis sp. nov., isolated from a paddy field soil.	Li J, Yang G, Wu M, Zhao Y, Zhou S	Antonie Van Leeuwenhoek	10.1007/s10482-014-0208-2	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42685

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105481

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96491

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400801.1 )

* These data were automatically processed and therefore are not curated

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Peribacillus huizhouensis DSM 105481

Peribacillus huizhouensis DSM 105481

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