Name: Ureibacillus composti HC145
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1400

Type strain:

Species: Ureibacillus composti

Strain Designation: HC145

Culture col. no.: DSM 17951, KACC 11361

Strain history: <- Soon-Wo Kwon, HC145

NCBI tax ID(s): 367742 (species)

SI-ID 402856

DSM 17951

Special Collections

Section

Ureibacillus composti HC145 is a spore-forming, Gram-negative, motile bacterium that forms circular colonies and was isolated from livestock-manure compost.

colony-forming
Gram-negative
motile
rod-shaped
spore-forming
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Ureibacillus*
	Species	**Ureibacillus composti**
	Full Scientific Name (LPSN)	Ureibacillus composti Weon et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #23026]	Gram stain	negative

[Ref.: #23026]	Cell length	2.5-4.0 µm

[Ref.: #23026]	Cell width	0.7-0.9 µm

[Ref.: #23026]	Cell shape	rod-shaped

[Ref.: #23026]	Motility	yes

[Ref.: #23026]	Colony color	light-brown
[Ref.: #23026]	Colony shape	circular
[Ref.: #23026]	Cultivation medium used	trypticase soy agar

[Ref.: #23026]	Cultivation medium used	nutrient agar (Oxoid)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7285]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #7285]

Culture medium growth

[Ref.: #7285]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7285]

Culture medium composition

expand / minimize

[Ref.: #23026]

Culture medium

nutrient agar (Oxoid)

[Ref.: #23026]

Culture medium growth

[Ref.: #23026]

Culture medium

trypticase soy agar

[Ref.: #23026]

Culture medium growth

	Kind of temperature		Temperature
[Ref.: #7285]		growth	50 °C
[Ref.: #23026]		growth	37.0-60.0 °C
[Ref.: #23026]	no	growth	35.0 °C
[Ref.: #23026]	no	growth	65.0 °C

	pH	Kind of pH		pH
[Ref.: #23026]			growth	6.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23026]	Spore description	spherical, subterminal or terminal
[Ref.: #23026]	Type of spore	endospore
[Ref.: #23026]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23026]		NaCl		growth	<5.0	%

[Ref.: #7285]	Murein short key	A11.31
[Ref.: #7285]	Murein types	A4alpha L-Lys-D-Asp
[Ref.: #23026]	Murein short key	A11.31
[Ref.: #23026]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23026]	casein	-	hydrolysis
[Ref.: #23026]	D-glucose ChEBI	-	builds acid from
[Ref.: #23026]	D-mannitol ChEBI	-	builds acid from
[Ref.: #23026]	D-xylose ChEBI	-	builds acid from
[Ref.: #23026]	esculin ChEBI	+	hydrolysis
[Ref.: #23026]	gelatin ChEBI	-	hydrolysis
[Ref.: #23026]	glucose ChEBI	-	fermentation
[Ref.: #23026]	L-arabinose ChEBI	-	builds acid from
[Ref.: #23026]	nitrate ChEBI	-	reduction
[Ref.: #23026]	starch ChEBI	-	hydrolysis
[Ref.: #23026]	tyrosine ChEBI	-	hydrolysis
[Ref.: #23026]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #23026]		acetoin ChEBI	no
[Ref.: #23026]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #23026]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #23026]	catalase	+	1.11.1.6
[Ref.: #23026]	cytochrome oxidase	+	1.9.3.1
[Ref.: #23026]	phenylalanine deaminase	+	4.3.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7285]	Sample type/isolated from	livestock-manure compost
[Ref.: #7285]	Geographic location (country and/or sea, region)	Ichon
[Ref.: #7285]	Country	Republic of Korea
[Ref.: #7285]	Country ISO 3 Code	KOR
[Ref.: #7285]	Continent	Asia

[Ref.: #23026]	Sample type/isolated from	livestock-manure compost
[Ref.: #23026]	Enrichment culture	trypticase soy agar
[Ref.: #23026]	Enrichment culture temperature	55.0 ̊C
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Livestock (Husbandry)
#Engineered	#Biodegradation	#Composting
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ348071 (>99% sequence identity) for Ureibacillus composti from Microbeatlas

Aquatic Samples	95
Soil Samples	306
Animal Samples	193
Plant Samples	149
Total Samples	743

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7285]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7285]	Ureibacillus composti strain HC145 16S ribosomal RNA gene, partial sequence	DQ348071	1515	GenBank ENA	367742 tax ID

[Ref.: #7285]	GC-content	42.4 mol%
[Ref.: #23026]	GC-content	42.4 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #7285]

Culture collection no.

DSM 17951, KACC 11361

[Ref.: #71051]

SI-ID 402856

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ureibacillus defluvii sp. nov., isolated from a thermophilic microbial fuel cell.	Zhou S, Tang J, Qin D, Lu Q, Yang G	Int J Syst Evol Microbiol	10.1099/ijs.0.056655-0	2014	*
Phylogeny	Ureibacillus composti sp. nov. and Ureibacillus thermophilus sp. nov., isolated from livestock-manure composts.	Weon HY, Lee SY, Kim BY, Noh HJ, Schumann P, Kim JS, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijs.0.65232-0	2007	*

References

#7285

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17951

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23026

Hang-Yeon Weon,Seon-Young Lee,Byung-Yong Kim,Hyung-Jun Noh,Peter Schumann,Jong-Shik Kim,Soon-Wo Kwon: Ureibacillus composti sp. nov. and Ureibacillus thermophilus sp. nov., isolated from livestock-manure composts. IJSEM 57: 2908 - 2911 2007 ( DOI 10.1099/ijs.0.65232-0 , PubMed 18048747 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71051

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402856.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Ureibacillus composti in external resources:
SILVA
BRENDA
PANGAEA
GBIF