Acinetobacter lwoffii CIP 70.31 is an aerobe, mesophilic, Gram-negative prokaryote of the family Moraxellaceae.
Gram-negative rod-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter lwoffii |
| Full scientific name Acinetobacter lwoffii (Audureau 1940) Brisou and Prévot 1954 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 42133 | 16947 ChEBI | citrate | - | carbon source | |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 42133 | 17234 ChEBI | glucose | - | degradation | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 42133 | 17632 ChEBI | nitrate | - | reduction | |
| 42133 | 17632 ChEBI | nitrate | - | respiration | |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 42133 | 16301 ChEBI | nitrite | - | reduction | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 42133 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 42133 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 42133 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | - | 1.9.3.1 | from API 20NE |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 42133 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 42133 | gelatinase | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 42133 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 42133 | urease | + | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | |||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||||||||||||||
| @ref | 62682 | ||||||||||||||||||||||||||||||||||||
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| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 42133 | 1 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Acin_lwof_CIP_70_31_V1 assembly for Acinetobacter lwoffii ATCC 9957 = CIP 70.31 | scaffold | 1311804 | 61.92 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Acinetobacter genomosp. 9 strain LMG 985 16S-23S ribosomal RNA intergenic spacer, complete sequence. | AY601836 | 701 | 28090 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.50 | no |
| 125439 | motility | BacteriaNetⓘ | no | 51.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 72.10 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 91.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.75 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.79 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 90.45 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 94.65 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.48 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 80.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Genome Analysis of Acinetobacter lwoffii Strains Isolated from Permafrost Soils Aged from 15 Thousand to 1.8 Million Years Revealed Their Close Relationships with Present-Day Environmental and Clinical Isolates. | Rakitin AL, Ermakova AY, Beletsky AV, Petrova M, Mardanov AV, Ravin NV. | Biology (Basel) | 10.3390/biology10090871 | 2021 | |
| Analysis of Phenol Biodegradation in Antibiotic and Heavy Metal Resistant Acinetobacter lwoffii NL1. | Xu N, Qiu C, Yang Q, Zhang Y, Wang M, Ye C, Guo M. | Front Microbiol | 10.3389/fmicb.2021.725755 | 2021 | ||
| Pathogenicity | Resistance of Permafrost and Modern Acinetobacter lwoffii Strains to Heavy Metals and Arsenic Revealed by Genome Analysis. | Mindlin S, Petrenko A, Kurakov A, Beletsky A, Mardanov A, Petrova M. | Biomed Res Int | 10.1155/2016/3970831 | 2016 | |
| Phylogeny | Identification of 50 class D beta-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp. | Perichon B, Goussard S, Walewski V, Krizova L, Cerqueira G, Murphy C, Feldgarden M, Wortman J, Clermont D, Nemec A, Courvalin P. | Antimicrob Agents Chemother | 10.1128/aac.01261-13 | 2014 | |
| Pathogenicity | AB569, a non-toxic combination of acidified nitrite and EDTA, is effective at killing the notorious Iraq/Afghanistan combat wound pathogens, multi-drug resistant Acinetobacter baumannii and Acinetobacter spp. | Bogue AL, Panmanee W, McDaniel CT, Mortensen JE, Kamau E, Actis LA, Johannigman JA, Schurr MJ, Satish L, Kotagiri N, Hassett DJ. | PLoS One | 10.1371/journal.pone.0247513 | 2021 | |
| Diverse responses to UV light exposure in Acinetobacter include the capacity for DNA damage-induced mutagenesis in the opportunistic pathogens Acinetobacter baumannii and Acinetobacter ursingii. | Hare JM, Bradley JA, Lin CL, Elam TJ. | Microbiology (Reading) | 10.1099/mic.0.054668-0 | 2012 | ||
| Phylogeny | Species, biotype, and bacteriophage type determinations compared with cell envelope protein profiles for typing Acinetobacter strains. | Bouvet PJ, Jeanjean S, Vieu JF, Dijkshoorn L. | J Clin Microbiol | 10.1128/jcm.28.2.170-176.1990 | 1990 | |
| Phylogeny | Cultural and chemical characterization of CDC groups EO-2, M-5, and M-6, Moraxella (Moraxella) species, Oligella urethralis, Acinetobacter species, and Psychrobacter immobilis. | Moss CW, Wallace PL, Hollis DG, Weaver RE. | J Clin Microbiol | 10.1128/jcm.26.3.484-492.1988 | 1988 | |
| Phylogeny | Interspecies transformation of Acinetobacter: genetic evidence for a ubiquitous genus. | Juni E. | J Bacteriol | 10.1128/jb.112.2.917-931.1972 | 1972 | |
| Acinetobacter spp. as nosocomial pathogens: microbiological, clinical, and epidemiological features. | Bergogne-Berezin E, Towner KJ. | Clin Microbiol Rev | 10.1128/cmr.9.2.148 | 1996 | ||
| Pathogenicity | Bioinformatic Analysis of the Type VI Secretion System and Its Potential Toxins in the Acinetobacter Genus. | Repizo GD, Espariz M, Seravalle JL, Salcedo SP. | Front Microbiol | 10.3389/fmicb.2019.02519 | 2019 | |
| Enzymology | Genes encoding OXA-134-like enzymes are found in Acinetobacter lwoffii and A. schindleri and can be used for identification. | Turton JF, Hyde R, Martin K, Shah J | J Clin Microbiol | 10.1128/JCM.06173-11 | 2012 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #42133 | Collection of Institut Pasteur ; Curators of the CIP; CIP 70.31 |
| #62682 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 61662 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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