Klebsiella pneumoniae KC100 is a Gram-negative, rod-shaped bacterium of the family Enterobacteriaceae.
Gram-negative rod-shaped genome sequence Bacteria| @ref 20215 |
Last LPSN update
2026-05-29 08:39:29 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Klebsiella |
| Species Klebsiella pneumoniae |
| Full scientific name Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM22048v1 assembly for Klebsiella pneumoniae KCTC 2242 | complete | GCA_000220485   | 1049565.4  | 651053036  | 1049565 | 98.67 |  |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| A novel XbaI multiplex PCR method for rapid typing of Klebsiella pneumoniae strains. | Al-Zahrani IA. | Sci Rep | 10.1038/s41598-025-99308-x | 2025 | | |
| Complete genome sequence of the Listeria innocua lytic bacteriophage LIS04. | Park S, Chang Y. | Microbiol Resour Announc | 10.1128/mra.00249-25 | 2025 | | |
| Hypervirulent Klebsiella pneumoniae causing bloodstream infections in Hungary. | Mohamed FA, Timmer B, Hargitai R, Melegh S, Meszena R, Pal T, Urban P, Herczeg R, Gyenesei A, Sonnevend A. | Microbiol Spectr | 10.1128/spectrum.00031-25 | 2025 | | |
| Multiplex PCR assay for the rapid detection of Klebsiella pneumoniae pathotypes. | Kulkarni SM, Jacob JJ, Praveen T, Aravind V, Subbulakshmi R, Preethi S, Lal B, Gunasekaran K, Manesh A, Karve SM, Sudarsana J, Bhattacharya S, Shah A, Nagaraj S, Padaki P, Jayakumar S, Mathew R, Rudresh SM, Qureshi S, Nivedhana S, Joe G, Rajni E, Walia K, Veeraraghavan B. | J Med Microbiol | 10.1099/jmm.0.002090 | 2025 | | |
| Antibacterial Activity of Jelleine-I, a Peptide Isolated from Royal Jelly of Apis mellifera, Against Colistin-Resistant Klebsiella pneumoniae. | Lima WG, Laia RMR, Brito JCM, Michel DAGR, Verly RM, Resende JM, de Lima ME. | Toxins (Basel) | 10.3390/toxins17070325 | 2025 | | |
| [Carbapenemase Genes, Virulence Genes, and Molecular Epidemiology of Carbapenem-Resistant Klebsiella pneumoniae Derived From Bloodstream Infections]. | Liao Q, Yuan Y, Zhang W, Deng J, Kang M. | Sichuan Da Xue Xue Bao Yi Xue Ban | 10.12182/20240360202 | 2024 | | |
| Safety Assessment and Evaluation of Probiotic Potential of Lactobacillus bulgaricus IDCC 3601 for Human Use. | Lee M, Bang WY, Lee HB, Yang SY, Lee KS, Kang HJ, Hong SM, Yang J. | Microorganisms | 10.3390/microorganisms12102063 | 2024 | | |
| Genomic Analysis of Multidrug-Resistant Hypervirulent (Hypermucoviscous) Klebsiella pneumoniae Strain Lacking the Hypermucoviscous Regulators (rmpA/rmpA2). | Altayb HN, Elbadawi HS, Baothman O, Kazmi I, Alzahrani FA, Nadeem MS, Hosawi S, Chaieb K. | Antibiotics (Basel) | 10.3390/antibiotics11050596 | 2022 | | |
| Hypervirulent Klebsiella pneumoniae Causing Neonatal Bloodstream Infections: Emergence of NDM-1-Producing Hypervirulent ST11-K2 and ST15-K54 Strains Possessing pLVPK-Associated Markers. | Mukherjee S, Bhadury P, Mitra S, Naha S, Saha B, Dutta S, Basu S. | Microbiol Spectr | 10.1128/spectrum.04121-22 | 2023 | | |
| Genetics | Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii. | Orel N, Fadeev E, Herndl GJ, Turk V, Tinta T. | BMC Genomics | 10.1186/s12864-024-10062-2 | 2024 | |
| Epidemiology and characterization of Providencia stuartii isolated from hospitalized patients in southern Brazil: a possible emerging pathogen. | Guidone GHM, Cardozo JG, Silva LC, Sanches MS, Galhardi LCF, Kobayashi RKT, Vespero EC, Rocha SPD. | Access Microbiol | 10.1099/acmi.0.000652.v4 | 2023 | | |
| Three New Depsipeptides, Homiamides A-C, Isolated from Streptomyces sp., ROA-065. | Kim JH, Lee JY, Lee J, Hillman PF, Lee J, Choi B, Paik MJ, Lee S, Nam SJ. | Molecules | 10.3390/molecules29235539 | 2024 | | |
| Potential of gamma-Aminobutyric Acid-Producing Leuconostoc mesenteroides Strains Isolated from Kimchi as a Starter for High-gamma-Aminobutyric Acid Kimchi Fermentation. | Ahn J, Park JY. | Prev Nutr Food Sci | 10.3746/pnf.2023.28.4.492 | 2023 | | |
| High-yield production of 1,3-propanediol from glycerol by metabolically engineered Klebsiella pneumoniae. | Lee JH, Jung MY, Oh MK. | Biotechnol Biofuels | 10.1186/s13068-018-1100-5 | 2018 | | |
| Identification of Pathogenic Factors in Klebsiella pneumoniae Using Impedimetric Sensor Equipped with Biomimetic Surfaces. | Huynh DTN, Kim AY, Kim YR. | Sensors (Basel) | 10.3390/s17061406 | 2017 | | |
| Pathogenicity | A Klebsiella pneumoniae ST307 outbreak clone from Germany demonstrates features of extensive drug resistance, hypermucoviscosity, and enhanced iron acquisition. | Heiden SE, Hubner NO, Bohnert JA, Heidecke CD, Kramer A, Balau V, Gierer W, Schaefer S, Eckmanns T, Gatermann S, Eger E, Guenther S, Becker K, Schaufler K. | Genome Med | 10.1186/s13073-020-00814-6 | 2020 | |
| Isolation and Characterization of a Weizmannia coagulans Bacteriophage Youna2 and Its Endolysin PlyYouna2. | Son B, Kim Y, Yu B, Kong M. | J Microbiol Biotechnol | 10.4014/jmb.2303.03021 | 2023 | | |
| Development of a Novel Short Synthetic Antibacterial Peptide Derived from the Swallowtail Butterfly Papilio xuthus Larvae. | Kim SR, Choi KH, Kim KY, Kwon HY, Park SW. | J Microbiol Biotechnol | 10.4014/jmb.2003.03009 | 2020 | | |
| Meirols A-C: Bioactive Catecholic Compounds from the Marine-Derived Fungus Meira sp. 1210CH-42. | Lee MA, Kang JS, Yang JW, Lee HS, Heo CS, Park SJ, Shin HJ. | Mar Drugs | 10.3390/md22020087 | 2024 | | |
| Genetics | Characterization of Silver Resistance and Coexistence of sil Operon with Antibiotic Resistance Genes Among Gram-Negative Pathogens Isolated from Wound Samples by Using Whole-Genome Sequencing. | Wang H, Li J, Min C, Xia F, Tang M, Li J, Hu Y, Zou M. | Infect Drug Resist | 10.2147/idr.s358730 | 2022 | |
| Genome Sequence of Klebsiella pneumoniae Ecl8, a Reference Strain for Targeted Genetic Manipulation. | Fookes M, Yu J, De Majumdar S, Thomson N, Schneiders T. | Genome Announc | 10.1128/genomea.00027-12 | 2013 | | |
| Genome-Wide Mapping of the Escherichia coli PhoB Regulon Reveals Many Transcriptionally Inert, Intragenic Binding Sites. | Fitzgerald DM, Stringer AM, Smith C, Lapierre P, Wade JT. | mBio | 10.1128/mbio.02535-22 | 2023 | | |
| Genetics | Distinctive features gleaned from the comparative genomes analysis of clinical and non-clinical isolates of Klebsiella pneumoniae. | Rajkumari J, Chakraborty S, Pandey P. | Bioinformation | 10.6026/97320630016256 | 2020 | |
| Metabolism | Improvement of 2,3-butanediol yield in Klebsiella pneumoniae by deletion of the pyruvate formate-lyase gene. | Jung MY, Mazumdar S, Shin SH, Yang KS, Lee J, Oh MK. | Appl Environ Microbiol | 10.1128/aem.02069-14 | 2014 | |
| Pathogenicity | Multidrug-resistant (MDR) Klebsiella pneumoniae clinical isolates: a zone of high heterogeneity (HHZ) as a tool for epidemiological studies. | Ramirez MS, Xie G, Marshall SH, Hujer KM, Chain PS, Bonomo RA, Tolmasky ME. | Clin Microbiol Infect | 10.1111/j.1469-0691.2012.03886.x | 2012 | |
| Transcriptome | Draft genome sequence of Klebsiella pneumoniae subsp. pneumoniae DSM 30104T. | Lee JH, Cheon IS, Shim BS, Kim DW, Kim SW, Chun J, Song M. | J Bacteriol | 10.1128/jb.01388-12 | 2012 | |
| Genetics | What we can see from very small size sample of metagenomic sequences. | Kwak J, Park J. | BMC Bioinformatics | 10.1186/s12859-018-2431-8 | 2018 | |
| A putative RND-type efflux pump, H239_3064, contributes to colistin resistance through CrrB in Klebsiella pneumoniae. | Cheng YH, Lin TL, Lin YT, Wang JT. | J Antimicrob Chemother | 10.1093/jac/dky054 | 2018 | | |
| Genetics | Complete genome sequence and comparative genome analysis of Klebsiella oxytoca HKOPL1 isolated from giant panda feces. | Jiang J, Tun HM, Mauroo NF, Ma AP, Chan SY, Leung FC. | BMC Res Notes | 10.1186/1756-0500-7-827 | 2014 | |
| Phylogeny | Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm. | Caputo A, Merhej V, Georgiades K, Fournier PE, Croce O, Robert C, Raoult D. | Biol Direct | 10.1186/s13062-015-0085-2 | 2015 | |
| Metabolism | Evolution and dissemination of OqxAB-like efflux pumps, an emerging quinolone resistance determinant among members of Enterobacteriaceae. | Wong MH, Chan EW, Chen S. | Antimicrob Agents Chemother | 10.1128/aac.00310-15 | 2015 | |
| Mapping the Evolution of Hypervirulent Klebsiella pneumoniae. | Struve C, Roe CC, Stegger M, Stahlhut SG, Hansen DS, Engelthaler DM, Andersen PS, Driebe EM, Keim P, Krogfelt KA. | mBio | 10.1128/mbio.00630-15 | 2015 | | |
| Network Integrative Genomic and Transcriptomic Analysis of Carbapenem-Resistant Klebsiella pneumoniae Strains Identifies Genes for Antibiotic Resistance and Virulence. | Lee M, Pinto NA, Kim CY, Yang S, D'Souza R, Yong D, Lee I. | mSystems | 10.1128/msystems.00202-19 | 2019 | | |
| Pathogenicity | Bee venom-derived antimicrobial peptide melectin has broad-spectrum potency, cell selectivity, and salt-resistant properties. | Ko SJ, Park E, Asandei A, Choi JY, Lee SC, Seo CH, Luchian T, Park Y. | Sci Rep | 10.1038/s41598-020-66995-7 | 2020 | |
| Complete sequence of a conjugative incn plasmid harboring blaKPC-2, blaSHV-12, and qnrS1 from an Escherichia coli sequence type 648 strain. | Li JJ, Lee CS, Sheng JF, Doi Y. | Antimicrob Agents Chemother | 10.1128/aac.03632-14 | 2014 | | |
| Virulence and Genomic Feature of a Virulent Klebsiella pneumoniae Sequence Type 14 Strain of Serotype K2 Harboring blaNDM-5 in China. | Mei YF, Liu PP, Wan LG, Liu Y, Wang LH, Wei DD, Deng Q, Cao XW. | Front Microbiol | 10.3389/fmicb.2017.00335 | 2017 | | |
| In silico analysis of usher encoding genes in Klebsiella pneumoniae and characterization of their role in adhesion and colonization. | Khater F, Balestrino D, Charbonnel N, Dufayard JF, Brisse S, Forestier C. | PLoS One | 10.1371/journal.pone.0116215 | 2015 | | |
| Genetics | Comparative analysis of the complete genome of KPC-2-producing Klebsiella pneumoniae Kp13 reveals remarkable genome plasticity and a wide repertoire of virulence and resistance mechanisms. | Ramos PI, Picao RC, Almeida LG, Lima NC, Girardello R, Vivan AC, Xavier DE, Barcellos FG, Pelisson M, Vespero EC, Medigue C, Vasconcelos AT, Gales AC, Nicolas MF. | BMC Genomics | 10.1186/1471-2164-15-54 | 2014 | |
| Selection and validation of reference genes for gene expression studies in Klebsiella pneumoniae using Reverse Transcription Quantitative real-time PCR. | Gomes AEI, Stuchi LP, Siqueira NMG, Henrique JB, Vicentini R, Ribeiro ML, Darrieux M, Ferraz LFC. | Sci Rep | 10.1038/s41598-018-27420-2 | 2018 | | |
| Genetics | Comparative Genomic Analysis of a Clinical Isolate of Klebsiella quasipneumoniae subsp. similipneumoniae, a KPC-2 and OKP-B-6 Beta-Lactamases Producer Harboring Two Drug-Resistance Plasmids from Southeast Brazil. | Nicolas MF, Ramos PIP, Marques de Carvalho F, Camargo DRA, de Fatima Morais Alves C, Loss de Morais G, Almeida LGP, Souza RC, Ciapina LP, Vicente ACP, Coimbra RS, Ribeiro de Vasconcelos AT. | Front Microbiol | 10.3389/fmicb.2018.00220 | 2018 | |
| Correlation of Klebsiella pneumoniae comparative genetic analyses with virulence profiles in a murine respiratory disease model. | Fodah RA, Scott JB, Tam HH, Yan P, Pfeffer TL, Bundschuh R, Warawa JM. | PLoS One | 10.1371/journal.pone.0107394 | 2014 | | |
| Identification of acquired antimicrobial resistance genes. | Zankari E, Hasman H, Cosentino S, Vestergaard M, Rasmussen S, Lund O, Aarestrup FM, Larsen MV. | J Antimicrob Chemother | 10.1093/jac/dks261 | 2012 | | |
| Genetics | Identification of Horizontally-transferred Genomic Islands and Genome Segmentation Points by Using the GC Profile Method. | Zhang R, Ou HY, Gao F, Luo H. | Curr Genomics | 10.2174/1389202915999140328163125 | 2014 | |
| Enzymology | Carbapenemase-producing Klebsiella pneumoniae: molecular and genetic decoding. | Chen L, Mathema B, Chavda KD, DeLeo FR, Bonomo RA, Kreiswirth BN. | Trends Microbiol | 10.1016/j.tim.2014.09.003 | 2014 | |
| Enzymology | A Novel Bacteriophage Targeting Cronobacter sakazakii Is a Potential Biocontrol Agent in Foods. | Lee JH, Bai J, Shin H, Kim Y, Park B, Heu S, Ryu S. | Appl Environ Microbiol | 10.1128/aem.01827-15 | 2016 | |
| Characterization of Klebsiella sp. strain 10982, a colonizer of humans that contains novel antibiotic resistance alleles and exhibits genetic similarities to plant and clinical Klebsiella isolates. | Hazen TH, Zhao L, Sahl JW, Robinson G, Harris AD, Rasko DA, Johnson JK. | Antimicrob Agents Chemother | 10.1128/aac.01605-13 | 2014 | | |
| Enzymology | Quorum Quenching Properties and Probiotic Potentials of Intestinal Associated Bacteria in Asian Sea Bass Lates calcarifer. | Ghanei-Motlagh R, Mohammadian T, Gharibi D, Menanteau-Ledouble S, Mahmoudi E, Khosravi M, Zarea M, El-Matbouli M. | Mar Drugs | 10.3390/md18010023 | 2019 | |
| Enzymology | Development of a multiplex-PCR probe system for the proper identification of Klebsiella variicola. | Garza-Ramos U, Silva-Sanchez J, Martinez-Romero E, Tinoco P, Pina-Gonzales M, Barrios H, Martinez-Barnetche J, Gomez-Barreto RE, Tellez-Sosa J. | BMC Microbiol | 10.1186/s12866-015-0396-6 | 2015 | |
| Comparison of conventional, nested, and real-time PCR assays for rapid and accurate detection of Vibrio vulnificus. | Kim HS, Kim DM, Neupane GP, Lee YM, Yang NW, Jang SJ, Jung SI, Park KH, Park HR, Lee CS, Lee SH. | J Clin Microbiol | 10.1128/jcm.00027-08 | 2008 | | |
| Enzymology | Investigation of antioxidant, antimicrobial and toxicity activities of lichens from high altitude regions of Nepal. | Jha BN, Shrestha M, Pandey DP, Bhattarai T, Bhattarai HD, Paudel B | BMC Complement Altern Med | 10.1186/s12906-017-1797-x | 2017 | |
| Enzymology | Complete nucleotide sequence of Klebsiella phage P13 and prediction of an EPS depolymerase gene. | Shang A, Liu Y, Wang J, Mo Z, Li G, Mou H | Virus Genes | 10.1007/s11262-014-1138-9 | 2014 | |
| Metabolism | Redistribution of carbon flux toward 2,3-butanediol production in Klebsiella pneumoniae by metabolic engineering. | Kim B, Lee S, Jeong D, Yang J, Oh MK, Lee J | PLoS One | 10.1371/journal.pone.0105322 | 2014 | |
| Listeria Monocytogenes La111 and Klebsiella Pneumoniae KCTC 2242: Shine-Dalgarno Sequences. | Motalleb G | Int J Mol Cell Med | 2014 | | ||
| Metabolism | The regulation of 2,3-butanediol synthesis in Klebsiella pneumoniae as revealed by gene over-expressions and metabolic flux analysis. | Lu M, Park C, Lee S, Kim B, Oh MK, Um Y, Kim J, Lee J | Bioprocess Biosyst Eng | 10.1007/s00449-013-0999-y | 2013 | |
| Enzymology | Enhanced activity of meso-secondary alcohol dehydrogenase from Klebsiella species by codon optimization. | Lee S, Kim B, Oh M, Kim Y, Lee J | Bioprocess Biosyst Eng | 10.1007/s00449-012-0824-z | 2012 | |
| Metabolism | Removal of pathogenic factors from 2,3-butanediol-producing Klebsiella species by inactivating virulence-related wabG gene. | Jung SG, Jang JH, Kim AY, Lim MC, Kim B, Lee J, Kim YR | Appl Microbiol Biotechnol | 10.1007/s00253-012-4284-9 | 2012 | |
| Metabolism | Enhanced 2,3-butanediol production in recombinant Klebsiella pneumoniae via overexpression of synthesis-related genes. | Kim B, Lee S, Park J, Lu M, Oh M, Kim Y, Lee J | J Microbiol Biotechnol | 10.4014/jmb.1201.01044 | 2012 | |
| Genetics | Complete genome sequence of the 2,3-butanediol-producing Klebsiella pneumoniae strain KCTC 2242. | Shin SH, Kim S, Kim JY, Lee S, Um Y, Oh MK, Kim YR, Lee J, Yang KS | J Bacteriol | 10.1128/JB.00027-12 | 2012 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive139425.20260601.11
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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