Name: Zoogloea resiniphila DhA-35
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13923

Type strain:

Species: Zoogloea resiniphila

Strain Designation: DhA-35

Variant: Isotype of BacDive ID 132049

Culture col. no.: DSM 17566, ATCC 700687, CIP 106709, JCM 21744, DSM 16780, IAM 15294, KCTC 12438

Strain history: CIP <- 2000, W.W. Mohn, British Columbia Univ., Vancouver, Canada: strain DhA-35

NCBI tax ID(s): 40561 (species)

SI-ID 264310

ATCC 700687, CIP 106709, KCTC 12438, CCUG 51656, JCM 21744, IAM 15294, DSM 16780, DSM 17566

Other strains from Zoogloea resiniphila

Z. resiniphila DhA-35, DSM 16780, ATCC 700687, ... (type strain)
Z. resiniphila PIV3A2w, DSM 14766

Section

Zoogloea resiniphila DhA-35 is a mesophilic, Gram-negative, motile bacterium that was isolated from Sequencing Batch Reactor.

Gram-negative
motile
rod-shaped
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Rhodocyclales*
	Family	*Zoogloeaceae*
	Genus	*Zoogloea*
	Species	**Zoogloea resiniphila**
	Full Scientific Name (LPSN)	Zoogloea resiniphila Mohn et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #122158]	Gram stain	negative

[Ref.: #122158]	Cell shape	rod-shaped

[Ref.: #122158]	Motility	yes

[Ref.: #122158]	Pigment production	no
[Ref.: #122158]	Pigment name	Pyocyanin

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7059]

Culture medium

TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)

[Ref.: #7059]

Culture medium growth

[Ref.: #7059]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7059]

Culture medium composition

expand / minimize

[Ref.: #34089]

Culture medium

MEDIUM 361 - for Zoogloea resiniphila

[Ref.: #34089]

Culture medium growth

[Ref.: #34089]

Culture medium composition

expand / minimize

	Kind of temperature		Temperature
[Ref.: #7059]		growth	30 °C
[Ref.: #34089]		growth	30 °C
[Ref.: #67770]		growth	27 °C
[Ref.: #122158]		growth	25-41 °C
[Ref.: #122158]	no	growth	5 °C
[Ref.: #122158]	no	growth	10 °C

[Ref.: #7059]	Temperature range	mesophilic
[Ref.: #34089]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #122158]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

	Salt	Tested relation		Salt conc.
[Ref.: #122158]	NaCl		growth	0	%
[Ref.: #122158]	NaCl	no	growth	2	%
[Ref.: #122158]	NaCl	no	growth	4	%
[Ref.: #122158]	NaCl	no	growth	6	%
[Ref.: #122158]	NaCl	no	growth	8	%
[Ref.: #122158]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #122158]	citrate ChEBI	-	carbon source
[Ref.: #122158]	esculin ChEBI	-	hydrolysis
[Ref.: #122158]	nitrate ChEBI	+	reduction
[Ref.: #122158]	nitrate ChEBI	+	respiration
[Ref.: #122158]	nitrite ChEBI	+	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #122158]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #122158]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #122158]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122158]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #122158]	caseinase	-	3.4.21.50
[Ref.: #122158]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #122158]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #122158]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #122158]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #122158]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122158]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #122158]	tryptophan deaminase	-
[Ref.: #122158]	tween esterase	-
[Ref.: #122158]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #122158]	1785	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122158]	9741	-	+	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7059]	Sample type/isolated from	Sequencing Batch Reactor
[Ref.: #7059]	Geographic location (country and/or sea, region)	British Columbia, Vancouver
[Ref.: #7059]	Country	Canada
[Ref.: #7059]	Country ISO 3 Code	CAN
[Ref.: #7059]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Laboratory sequencing batch reactor in Vancouver
[Ref.: #67770]	Geographic location (country and/or sea, region)	British Columbia
[Ref.: #67770]	Country	Canada
[Ref.: #67770]	Country ISO 3 Code	CAN
[Ref.: #67770]	Continent	North America

[Ref.: #122158]	Sample type/isolated from	Sequencing batch bioreactor
[Ref.: #122158]	Geographic location (country and/or sea, region)	Vancouver
[Ref.: #122158]	Country	Canada
[Ref.: #122158]	Country ISO 3 Code	CAN
[Ref.: #122158]	Continent	North America
[Ref.: #122158]	Isolation date	1994
* marker position based on {}

Isolation sources categories

#Engineered

#Bioreactor

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7059]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122158]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7059]	Zoogloea resiniphila partial 16S rRNA gene, type strain DhA-35T	AJ011506	1473	ENA	40561 tax ID

Availability in culture collections External links

[Ref.: #7059]

Culture collection no.

DSM 17566, ATCC 700687, CIP 106709, JCM 21744, DSM 16780, IAM 15294, KCTC 12438

[Ref.: #83097]

SI-ID 264310

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Zoogloea oleivorans sp. nov., a floc-forming, petroleum hydrocarbon-degrading bacterium isolated from biofilm.	Farkas M, Tancsics A, Kriszt B, Benedek T, Toth EM, Keki Z, Veres PG, Szoboszlay S	Int J Syst Evol Microbiol	10.1099/ijs.0.068486-0	2014	*
Phylogeny	Zoogloea caeni sp. nov., a floc-forming bacterium isolated from activated sludge.	Shao Y, Chung BS, Lee SS, Park W, Lee SS, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.65670-0	2009	*
Metabolism	Bioaugmentation with the resin acid-degrading bacterium Zoogloea resiniphila DhA-35 to counteract pH stress in an aerated lagoon treating pulp and paper mill effluent.	Yu Z, Mohn WW	Water Res	10.1016/s0043-1354(01)00496-1	2002	*
Metabolism	Bioaugmentation with resin-acid-degrading bacteria enhances resin acid removal in sequencing batch reactors treating pulp mill effluents.	Yu Z, Mohn WW	Water Res	10.1016/s0043-1354(00)00335-3	2001	*
Metabolism	Occurrence of Two Resin Acid-Degrading Bacteria and a Gene Encoding Resin Acid Biodegradation in Pulp and Paper Mill Effluent Biotreatment Systems Assayed by PCR.	Yu Z, Martin VJ, Mohn WW	Microb Ecol	10.1007/s002489900163	1999	*

References

#7059

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17566

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#34089 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#83097

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID264310.1 )

#122158 Collection of Institut Pasteur ; Curators of the CIP; CIP 106709
* These data were automatically processed and therefore are not curated

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