Thauera aminoaromatica (DSM 14742, LMG 26917, S2)

Name: Thauera aminoaromatica (DSM 14742, LMG 26917, S2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13917

Type strain

Strain Designation S2

Culture col. no. DSM 14742 LMG 26917 S2 CIP 110164

NCBI tax ID(s) 164330

Special Collections DSMZ CIP

Links

Thauera aminoaromatica S2 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from anaerobic sawage sludge.

Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 87977

DSM 14742,LMG 26917,CIP 110164

@ref 20215

Last LPSN update 2025-12-16 09:50:13

Domain Pseudomonadati

Phylum Pseudomonadota

Class Betaproteobacteria

Order Rhodocyclales

Family Zoogloeaceae

Genus Thauera

Species Thauera aminoaromatica

Full scientific name Thauera aminoaromatica Mechichi et al. 2002

BacDive ID	Other strains from **Thauera aminoaromatica** (1)	Type strain
131088	T. aminoaromatica MZ1, DSM 25461

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
116331	negative	rod-shaped
125438	negative		98.985
125439	negative		91.6

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5437	REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c)	Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c) Composition: Agar 15.0 g/l Yeast extract 0.5 g/l Proteose peptone 0.5 g/l Casamino acids 0.5 g/l Glucose 0.5 g/l Starch 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
5437	THAUERA AROMATICA MEDIUM (DSMZ Medium 586)	Medium recipe at MediaDive	Name: THAUERA AROMATICA MEDIUM (DSMZ Medium 586) Composition: K2HPO4 5.83251 g/l KNO3 1.97044 g/l KH2PO4 0.803941 g/l Na-benzoate 0.70936 g/l NH4Cl 0.522168 g/l MgSO4 x 7 H2O 0.197044 g/l CaCl2 x 2 H2O 0.0246305 g/l HCl 0.0246305 g/l FeCl2 x 4 H2O 0.0147783 g/l CoCl2 x 6 H2O 0.00187192 g/l MnCl2 x 4 H2O 0.000985222 g/l ZnCl2 0.000689655 g/l Na2MoO4 x 2 H2O 0.00035468 g/l p-Aminobenzoic acid 0.000246305 g/l alpha-lipoic acid 0.000246305 g/l Riboflavin 0.000246305 g/l Pantothenic acid 0.000246305 g/l Vitamin B12 0.000246305 g/l Thiamine-HCl x 2 H2O 0.000246305 g/l NiCl2 x 6 H2O 0.000236453 g/l Nicotine amide 0.000123153 g/l Nicotinic acid 0.000123153 g/l Folic acid 9.85222e-05 g/l Biotin 9.85222e-05 g/l H3BO3 5.91133e-05 g/l Pyridoxamine hydrochloride 4.92611e-05 g/l CuCl2 x 2 H2O 1.97044e-05 g/l Distilled water
40651	MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati		Distilled water make up to (1000.000 ml);R2A agar (18.200 g)
116331	CIP Medium 566	Medium recipe at CIP
5437	Thauera aminoaromatica medium (DSMZ Medium 1867)	Medium recipe provided by DSMZ

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5437	positive	growth	30	mesophilic
40651	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
5437	aerobe
5437	anaerobe
116331	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		97.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
116331	17632 ChEBI	nitrate	+	reduction
116331	16301 ChEBI	nitrite	+	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116331	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116331	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116331	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
116331	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116331	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Waste	#Sewage sludge
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
5437	anaerobic sawage sludge	Konstanz	Germany	DEU	Europe
116331	Environment, Sewage sludge		Germany	DEU	Europe	1991

Taxonmaps

69479

Global distribution of 16S sequence AJ315677 (>99% sequence identity) for Thauera from Microbeatlas

Aquatic Samples	491
Soil Samples	20
Animal Samples	31
Plant Samples	6
Total Samples	548

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5437	1	Risk group (German classification) According to TRBA 466
116331	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM31018v1 assembly for Thauera aminoaromatica S2	contig	GCA_000310185	1234381.3	2537561694	1234381	13.93

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5437	Thauera sp. S2 16S rRNA gene, strain S2	AJ315677	1496		1234381

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Thauera aminoaromatica S2
NCBI: GCA_000310185

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	81.30	no
125439	gram_stain	BacteriaNetⓘ	negative	91.60	no
125439	motility	BacteriaNetⓘ	yes	83.10	no
125439	spore_formation	BacteriaNetⓘ	no	97.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thauera aminoaromatica S2
PATRIC: 1234381.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.99	no
125438	anaerobic	anaerobicⓘ	no	77.67	no
125438	spore-forming	spore-formingⓘ	no	89.23	no
125438	aerobic	aerobicⓘ	yes	54.88	no
125438	thermophilic	thermophileⓘ	no	92.99	yes
125438	flagellated	motile2+ⓘ	yes	83.83	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of Thauera aminoaromatica strain MZ1T.	Jiang K, Sanseverino J, Chauhan A, Lucas S, Copeland A, Lapidus A, Del Rio TG, Dalin E, Tice H, Bruce D, Goodwin L, Pitluck S, Sims D, Brettin T, Detter JC, Han C, Chang YJ, Larimer F, Land M, Hauser L, Kyrpides NC, Mikhailova N, Moser S, Jegier P, Close D, Debruyn JM, Wang Y, Layton AC, Allen MS, Sayler GS.	Stand Genomic Sci	10.4056/sigs.2696029	2012
Phylogeny	Thauera propionica sp. nov., isolated from downstream sediment sample of the river Ganges, Kanpur, India.	Pal D, Bhardwaj A, Sudan SK, Kaur N, Kumari M, Bisht B, Vyas B, Krishnamurthi S, Mayilraj S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002508	2017

References

#5437	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14742
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#40651	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116331	Collection of Institut Pasteur ; Curators of the CIP; CIP 110164
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thauera aminoaromatica (DSM 14742, LMG 26917, S2)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000310185

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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