Name: Thauera aminoaromatica S2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13917

Type strain:

Species: Thauera aminoaromatica

Strain Designation: S2

Culture col. no.: DSM 14742, LMG 26917, CIP 110164

Strain history: CIP <- 2010, DSMZ <- G. Fuchs, Freiburg Univ., Freiburg, Germany <- E. Lang, DSMZ, Braunschweig, Germany: strain S2

NCBI tax ID(s): 164330 (species)

SI-ID 87977

DSM 14742, LMG 26917, CIP 110164

Other strains from Thauera aminoaromatica

T. aminoaromatica MZ1, DSM 25461

Section

Thauera aminoaromatica S2 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from anaerobic sawage sludge.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Rhodocyclales*
	Family	*Zoogloeaceae*
	Genus	*Thauera*
	Species	**Thauera aminoaromatica**
	Full Scientific Name (LPSN)	Thauera aminoaromatica Mechichi et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #116331]	Gram stain	negative

[Ref.: #116331]	Cell shape	rod-shaped

[Ref.: #116331]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5437]

Culture medium

REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c)

[Ref.: #5437]

Culture medium growth

[Ref.: #5437]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5437]

Culture medium composition

expand / minimize

[Ref.: #5437]

Culture medium

THAUERA AROMATICA MEDIUM (DSMZ Medium 586)

[Ref.: #5437]

Culture medium growth

[Ref.: #5437]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5437]

Culture medium composition

expand / minimize

[Ref.: #40651]

Culture medium

MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati

[Ref.: #40651]

Culture medium growth

[Ref.: #40651]

Culture medium composition

expand / minimize

[Ref.: #116331]

Culture medium

CIP Medium 566

[Ref.: #116331]

Culture medium growth

[Ref.: #116331]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #5437]			growth	30 °C
[Ref.: #40651]			growth	30 °C

[Ref.: #5437]	Temperature range	mesophilic
[Ref.: #40651]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5437]	Oxygen tolerance	aerobe
[Ref.: #5437]	Oxygen tolerance	anaerobe
[Ref.: #116331]	Oxygen tolerance	obligate aerobe

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #116331]		nitrate ChEBI	+	reduction
[Ref.: #116331]		nitrite ChEBI	+	reduction

	Metabolite production	Metabolite	Production
[Ref.: #116331]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116331]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116331]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116331]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116331]	12403	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5437]	Sample type/isolated from	anaerobic sawage sludge
[Ref.: #5437]	Geographic location (country and/or sea, region)	Konstanz
[Ref.: #5437]	Country	Germany
[Ref.: #5437]	Country ISO 3 Code	DEU
[Ref.: #5437]	Continent	Europe

[Ref.: #116331]	Sample type/isolated from	Environment, Sewage sludge
[Ref.: #116331]	Country	Germany
[Ref.: #116331]	Country ISO 3 Code	DEU
[Ref.: #116331]	Continent	Europe
[Ref.: #116331]	Isolation date	1991
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	#Sewage sludge
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ315677 (>99% sequence identity) for Thauera from Microbeatlas

Aquatic Samples	491
Soil Samples	20
Animal Samples	31
Plant Samples	6
Total Samples	548

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5437]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116331]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5437]	Thauera sp. S2 16S rRNA gene, strain S2	AJ315677	1496	ENA	1234381 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thauera aminoaromatica S2	GCA_000310185	contig	GenBank	1234381 tax ID	*
[Ref.: #66792]	Thauera aminoaromatica S2	1234381.3	wgs	PATRIC	1234381 tax ID	*
[Ref.: #66792]	Thauera aminoaromatica S2	2537561694	draft	JGI IMG/M	1234381 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thauera aminoaromatica S2 PATRIC: 1234381.3
[Ref.: #69480]	motile	yes	90.822	no
[Ref.: #69480]	gram-positive	no	99.241	no
[Ref.: #69480]	anaerobic	no	90.792	no
[Ref.: #69480]	aerobic	no	67.756	no
[Ref.: #69480]	halophile	no	92.074	no
[Ref.: #69480]	spore-forming	no	94.161	no
[Ref.: #69480]	glucose-util	no	73.913	no
[Ref.: #69480]	flagellated	yes	91.153	no
[Ref.: #69480]	thermophile	no	94.822	yes
[Ref.: #69480]	glucose-ferment	no	87.107	no

Availability in culture collections External links

[Ref.: #5437]

Culture collection no.

DSM 14742, LMG 26917, CIP 110164

[Ref.: #83092]

SI-ID 87977

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thauera propionica sp. nov., isolated from downstream sediment sample of the river Ganges, Kanpur, India.	Pal D, Bhardwaj A, Sudan SK, Kaur N, Kumari M, Bisht B, Vyas B, Krishnamurthi S, Mayilraj S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002508	2017	*

References

#5437

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14742

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#40651 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#83092

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID87977.1 )

#116331 Collection of Institut Pasteur ; Curators of the CIP; CIP 110164
* These data were automatically processed and therefore are not curated

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