Name: Azospira oryzae GR-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13890

Type strain:

Species: Azospira oryzae

Strain Designation: GR-1

Culture col. no.: DSM 11199

Strain history: <- A. G. M. Kroon, Akzo Nobel Central Research; GR-1

NCBI tax ID(s): 146939 (species)

SI-ID 49049

DSM 11199

Other strains from Azospira oryzae

A. oryzae 6a3, DSM 21223, CCUG 45016, LMG ... (type strain)
A. oryzae PS, DSM 13638, ATCC BAA-33
A. oryzae CCUG 10488, CCUG 34302, ATCC 51563, ...
A. oryzae CCUG 13232, CCUG 34304, ATCC 51564, ...
A. oryzae CCUG 64447
A. oryzae CCUG 69608 B

Section

Azospira oryzae GR-1 is an anaerobe, mesophilic bacterium that was isolated from aerobic sewage sludge.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Rhodocyclales*
	Family	*Rhodocyclaceae*
	Genus	*Azospira*
	Species	**Azospira oryzae**
	Full Scientific Name (LPSN)	Azospira oryzae Reinhold-Hurek and Hurek 2000

	Synonym	"Dechlorisoma* suillus"*
	Synonym	Dechlorosoma suillum
	Synonym	Dechloromonas suillum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4233]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #4233]

Culture medium growth

[Ref.: #4233]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4233]

Culture medium composition

expand / minimize

[Ref.: #4233]

Culture medium

MINERAL MEDIUM PH 7.25 (DSMZ Medium 465)

[Ref.: #4233]

Culture medium growth

[Ref.: #4233]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4233]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4233]			growth	28 °C

[Ref.: #4233]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4233]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4233]	Sample type/isolated from	aerobic sewage sludge
[Ref.: #4233]	Country	Netherlands
[Ref.: #4233]	Country ISO 3 Code	NLD
[Ref.: #4233]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Sewage sludge

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY277622 (>99% sequence identity) for Azospira oryzae subclade from Microbeatlas

Aquatic Samples	15144
Soil Samples	5057
Animal Samples	9661
Plant Samples	2139
Total Samples	32001

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4233]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4233]	Azospira oryzae strain GR-1 16S ribosomal RNA gene, partial sequence	AY277622	1486	ENA	146939 tax ID

Availability in culture collections External links

[Ref.: #4233]

Culture collection no.

DSM 11199

[Ref.: #83065]

SI-ID 49049

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Crystal structure of chlorite dismutase, a detoxifying enzyme producing molecular oxygen.	de Geus DC, Thomassen EA, Hagedoorn PL, Pannu NS, van Duijn E, Abrahams JP	J Mol Biol	10.1016/j.jmb.2009.01.036	2009	*
Enzymology	Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of chlorite dismutase: a detoxifying enzyme producing molecular oxygen.	de Geus DC, Thomassen EA, van der Feltz CL, Abrahams JP	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/S1744309108020551	2008	*
Phylogeny	Dechloromonas hortensis sp. nov. and strain ASK-1, two novel (per)chlorate-reducing bacteria, and taxonomic description of strain GR-1.	Wolterink A, Kim S, Muusse M, Kim IS, Roholl PJM, van Ginkel CG, Stams AJM, Kengen SWM	Int J Syst Evol Microbiol	10.1099/ijs.0.63404-0	2005	*

References

#4233

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11199

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#83065

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49049.1 )

* These data were automatically processed and therefore are not curated

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