Acinetobacter parvus (CIP 110475, NIPH 1103, LMG 21766)

Name: Acinetobacter parvus (CIP 110475, NIPH 1103, LMG 21766)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 138820

Type strain

Culture col. no. CIP 110475 NIPH 1103 LMG 21766 LUH 3313

NCBI tax ID(s) 1217671 134533

Special Collections CIP

Links

Acinetobacter parvus CIP 110475 is a mesophilic, Gram-negative, rod-shaped prokaryote of the family Moraxellaceae.

Gram-negative rod-shaped mesophilic genome sequence

Name and taxonomic classification

SI-ID 128230

LMG 21766

@ref 20215

Last LPSN update 2025-12-16 10:03:10

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Moraxellaceae

Genus Acinetobacter

Species Acinetobacter parvus

Full scientific name Acinetobacter parvus Nemec et al. 2003

BacDive ID	Other strains from **Acinetobacter parvus** (19)	Type strain
8139	A. parvus DSM 16617, CCM 7030, CCUG 48866, LMG 21765, ... (type strain)
134448	A. parvus 2288, CIP 102129
134716	A. parvus 10535, CIP 110364
134952	A. parvus CIP 110755, NIPH 1907
139431	A. parvus CIP 110752, NIPH 476
139613	A. parvus CIP 102529
143461	A. parvus CCUG 19391
146693	A. parvus CCUG 31958
147242	A. parvus CCUG 33172
150562	A. parvus CCUG 41605
152037	A. parvus CCUG 45618
153436	A. parvus CCUG 49585, CIP 110758, ANC 3628
153921	A. parvus CCUG 51650
173376	A. parvus CIP 102159
173377	A. parvus CIP 102637
173378	A. parvus CIP 110753, NIPH 1516
173379	A. parvus CIP 110754, NIPH 1906
173380	A. parvus CIP 110756, NIPH 1908
173381	A. parvus CIP 110757, NIPH 1930

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
125438	negative			99
40763	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
40763	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
40763	CIP Medium 72			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
40763	positive	growth	25	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	93.5

Spore formation

@ref	Spore formation	Confidence
125438		94.23
125439		98.8

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
40763	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
40763		Leiden	Netherlands	NLD	Europe
40763	Human, Skin	Leiden	Netherlands	NLD	Europe	1995

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
40763	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Acin_parv_NIPH_1103_V1 assembly for Acinetobacter parvus NIPH 1103	scaffold	GCA_000368005	1217671.3	2565956643	1217671	69.51

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Acinetobacter parvus NIPH 1103
NCBI: GCA_000368005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.50	no
125439	gram_stain	BacteriaNetⓘ	negative	88.90	no
125439	motility	BacteriaNetⓘ	no	51.20	no
125439	spore_formation	BacteriaNetⓘ	no	98.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acinetobacter parvus NIPH 1103 NIPH 1103
NCBI: GCA_000368005.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	no
125438	anaerobic	anaerobicⓘ	no	97.58	no
125438	aerobic	aerobicⓘ	yes	89.79	no
125438	spore-forming	spore-formingⓘ	no	94.23	no
125438	thermophilic	thermophileⓘ	no	99.00	no
125438	flagellated	motile2+ⓘ	no	76.31	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Identification of 50 class D beta-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp.	Perichon B, Goussard S, Walewski V, Krizova L, Cerqueira G, Murphy C, Feldgarden M, Wortman J, Clermont D, Nemec A, Courvalin P.	Antimicrob Agents Chemother	10.1128/aac.01261-13	2014
Metabolism	Prokaryotic viperins produce diverse antiviral molecules.	Bernheim A, Millman A, Ofir G, Meitav G, Avraham C, Avraham C, Shomar H, Rosenberg MM, Tal N, Melamed S, Amitai G, Sorek R.	Nature	10.1038/s41586-020-2762-2	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#40763	Collection of Institut Pasteur ; Curators of the CIP; CIP 110475
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acinetobacter parvus (CIP 110475, NIPH 1103, LMG 21766)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Enzymes

API zym

Isolation, sampling and environmental information

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000368005

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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