Name: Marivita litorea CL-JM1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 13852

Type strain:

Species: Marivita litorea

Strain Designation: CL-JM1

Culture col. no.: DSM 21329, JCM 15446, KCCM 90071

Strain history: B. C. Cho CL-JM1.

NCBI tax ID(s): 505251 (species)

SI-ID 406754

DSM 21329

Special Collections

Section

When using BacDive for research please cite our paper

Marivita litorea CL-JM1 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from coastal seawater.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Marivita*
	Species	**Marivita litorea**
	Full Scientific Name (LPSN)	Marivita litorea Hwang et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #29071]	Gram stain	negative

[Ref.: #29071]	Cell length	2.25 µm

[Ref.: #29071]	Cell width	0.6 µm

[Ref.: #29071]	Cell shape	rod-shaped

[Ref.: #29071]	Motility	yes

[Ref.: #29071]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15616]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #15616]

Culture medium growth

[Ref.: #15616]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15616]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15616]	growth	28 °C
[Ref.: #29071]	growth	15-33 °C
[Ref.: #29071]	optimum	30 °C
[Ref.: #67770]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #29071]			optimum	7.5
[Ref.: #29071]			growth	06-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29071]

Oxygen tolerance

aerobe

[Ref.: #67770]

Observation

quinones: Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29071]	esculin ChEBI	+	hydrolysis
[Ref.: #29071]	tween 40 ChEBI	+	carbon source
[Ref.: #29071]	tween 80 ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #29071]	acid phosphatase	+	3.1.3.2
[Ref.: #29071]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29071]	catalase	+	1.11.1.6
[Ref.: #29071]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15616]	Sample type/isolated from	coastal seawater
[Ref.: #15616]	Geographic location (country and/or sea, region)	JooMoonjin harbor
[Ref.: #15616]	Country	Republic of Korea
[Ref.: #15616]	Country ISO 3 Code	KOR
[Ref.: #15616]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Coastal seawater of the east coast of Korea
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU512918 (>99% sequence identity) for Marivita from Microbeatlas

Aquatic Samples	812
Soil Samples	109
Animal Samples	113
Plant Samples	7
Total Samples	1041

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15616]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15616]	Marivita litorea strain CL-JM1 16S ribosomal RNA gene, partial sequence	EU512918	1369	GenBank ENA	505251 tax ID

[Ref.: #15616]	GC-content	61.0 mol%
[Ref.: #29071]	GC-content	61 mol%
[Ref.: #67770]	GC-content	61 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #15616]

Culture collection no.

DSM 21329, JCM 15446, KCCM 90071

[Ref.: #83028]

SI-ID 406754

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marivita lacus sp. nov., isolated from a saline lake.	Zhong ZP, Liu Y, Hou TT, Liu HC, Zhou YG, Wang F, Liu ZP	Int J Syst Evol Microbiol	10.1099/ijs.0.000195	2015	*
Phylogeny	Marivita cryptomonadis gen. nov., sp. nov. and Marivita litorea sp. nov., of the family Rhodobacteraceae, isolated from marine habitats.	Hwang CY, Bae GD, Yih W, Cho BC	Int J Syst Evol Microbiol	10.1099/ijs.0.005462-0	2009	*

References

#15616

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21329

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29071

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25501 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#83028

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406754.1 )

#25501

IJSEM 1568 2009 ( DOI 10.1099/ijs.0.005462-0 , PubMed 19528201 )

* These data were automatically processed and therefore are not curated

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