Name: Mycobacterium barrassiae N7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 138449

Type strain:

Species: Mycobacterium barrassiae

Strain Designation: N7

Culture col. no.: CIP 108545, CCUG 50398

Strain history: CIP <- 2004, M. Drancourt, Timone Hosp., Marseille, France: strain N7

NCBI tax ID(s): 319709 (species)

Section

Mycobacterium barrassiae N7 is an aerobe, mesophilic, rod-shaped bacterium of the family Mycobacteriaceae.

rod-shaped
aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	"Mycobacterium barrassiae"
	Full Scientific Name (LPSN)	Mycobacterium barrassiae Adékambi et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #39754]	Cell shape	rod-shaped

[Ref.: #39754]	Motility	no

Information on culture and growth conditions Culture and growth conditions

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Culture medium

MEDIUM 93 - for Mycobacterium avium subsp. sylvaticum

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

CIP Medium 93

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

CIP Medium 602

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #39754]		growth	30 °C
[Ref.: #39754]		growth	22-30 °C
[Ref.: #39754]	no	growth	10 °C
[Ref.: #39754]	no	growth	45 °C
[Ref.: #58855]		growth	30 °C

[Ref.: #39754]	Temperature range	mesophilic
[Ref.: #39754]	Temperature range	psychrophilic
[Ref.: #39754]	Temperature range	thermophilic
[Ref.: #58855]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #58855]	Oxygen tolerance	aerobe
[Ref.: #39754]	Oxygen tolerance	obligate aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #39754]	hippurate ChEBI	-	hydrolysis
[Ref.: #39754]	nitrate ChEBI	+	reduction
[Ref.: #39754]	nitrate ChEBI	-	respiration
[Ref.: #39754]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #39754]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #39754]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #39754]	amylase	+
[Ref.: #39754]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #39754]	caseinase	-	3.4.21.50
[Ref.: #39754]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #39754]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #39754]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #39754]	gelatinase	-
[Ref.: #39754]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #39754]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #39754]	oxidase	-
[Ref.: #39754]	protease	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #39754]	tween esterase	+
[Ref.: #39754]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #39754]	11271	-	-	+	+	-	+	-	+	+	-	-	+	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #58855]	Sample type/isolated from	Human bronchial lavage,49-yr-old woman
[Ref.: #58855]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #58855]	Country	France
[Ref.: #58855]	Country ISO 3 Code	FRA
[Ref.: #58855]	Continent	Europe

[Ref.: #39754]	Sample type/isolated from	Human, Broncial lavage
[Ref.: #39754]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #39754]	Country	France
[Ref.: #39754]	Country ISO 3 Code	FRA
[Ref.: #39754]	Continent	Europe
[Ref.: #39754]	Isolation date	1999

[Ref.: #39754]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #39754]	Country	France
[Ref.: #39754]	Country ISO 3 Code	FRA
[Ref.: #39754]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	#Female
#Host Body-Site	#Oral cavity and airways	#Lung
#Infection	#Medical environment	#Medical practice

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycobacterium barrassiae CCUG 50398	GCA_025822765	scaffold	GenBank	319709 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycobacterium barrassiae CCUG 50398 NCBI: GCA_025822765.1
[Ref.: #69480]	motile	no	92.99	no
[Ref.: #69480]	flagellated	no	98.455	no
[Ref.: #69480]	gram-positive	yes	91.145	no
[Ref.: #69480]	anaerobic	no	99.265	no
[Ref.: #69480]	aerobic	yes	92.267	yes
[Ref.: #69480]	halophile	no	91.554	no
[Ref.: #69480]	spore-forming	no	87.774	no
[Ref.: #69480]	glucose-ferment	no	90.906	no
[Ref.: #69480]	thermophile	no	99.457	no
[Ref.: #69480]	glucose-util	yes	85.289	no

Availability in culture collections External links

[Ref.: #39754]

Culture collection no.

CIP 108545, CCUG 50398

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mycobacterium barrassiae sp. nov., a Mycobacterium moriokaense group species associated with chronic pneumonia.	Adekambi T, Raoult D, Drancourt M	J Clin Microbiol	10.1128/JCM.00724-06	2006	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#39754 Collection of Institut Pasteur ; Curators of the CIP; CIP 108545
#58855 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 50398

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Mycobacterium barrassiae CCUG 50398

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