Name: Haemophilus ducreyi CIP 54.2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 138208

Type strain:

Species: Haemophilus ducreyi

Culture col. no.: CIP 54.2, ATCC 33940, CCUG 4438, DSM 8925, NCTC 10945, CIP 542

NCBI tax ID(s): 730 (species)

Other strains from Haemophilus ducreyi

Section

Haemophilus ducreyi CIP 54.2 is a microaerophile, mesophilic bacterium of the family Pasteurellaceae.

mesophilic
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pasteurellales*
	Family	*Pasteurellaceae*
	Genus	*Haemophilus*
	Species	**Haemophilus ducreyi**
	Full Scientific Name (PNU)	Haemophilus ducreyi (Neveu-Lemaire 1921) Bergey et al. 1923 (Approved Lists 1980)

Synonym

"Coccobacillus ducreyi"

Information on morphological and physiological properties Morphology

[Ref.: #44749]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #39281]

Culture medium

MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria

[Ref.: #39281]

Culture medium growth

[Ref.: #39281]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #39281]			growth	30 °C
[Ref.: #44749]			growth	33 °C

[Ref.: #39281]	Temperature range	mesophilic
[Ref.: #44749]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #44749]

Oxygen tolerance

microaerophile

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68377]	D-fructose ChEBI	-	builds acid from	* from API NH
[Ref.: #68377]	D-glucose ChEBI	-	builds acid from	* from API NH
[Ref.: #68377]	maltose ChEBI	-	builds acid from	* from API NH
[Ref.: #68377]	ornithine ChEBI	-	degradation	* from API NH
[Ref.: #68377]	sucrose ChEBI	-	builds acid from	* from API NH
[Ref.: #68377]	tryptophan ChEBI	-	energy source	* from API NH
[Ref.: #68377]	urea ChEBI	-	hydrolysis	* from API NH

	Metabolite production	Metabolite
[Ref.: #68377]		indole ChEBI	* from API NH

	Physiological tests	Metabolite	Indole test
[Ref.: #68377]		indole ChEBI	-	* from API NH

	Enzyme	Enzyme activity	EC number
[Ref.: #68377]	alkaline phosphatase	+	3.1.3.1	* from API NH
[Ref.: #68377]	beta-galactosidase	-	3.2.1.23	* from API NH
[Ref.: #68377]	beta-lactamase	-	3.5.2.6	* from API NH
[Ref.: #68377]	gamma-glutamyltransferase	-	2.3.2.2	* from API NH
[Ref.: #68377]	lipase	-		* from API NH
[Ref.: #68377]	ornithine decarboxylase	-	4.1.1.17	* from API NH
[Ref.: #68377]	proline-arylamidase	-	3.4.11.5	* from API NH
[Ref.: #68377]	tryptophan deaminase	-	4.1.99.1	* from API NH
[Ref.: #68377]	urease	-	3.5.1.5	* from API NH

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #44749]

Fatty acid	Percentage	ECL
C16:0	23.8	16
C16:1 ω7c	22.7	15.819
C14:0	18.8	14
C18:2 ω6,9c/C18:0 ANTE	10.9	17.724
C18:1 ω9c	9.9	17.769
C14:0 3OH/C16:1 ISO I	6.2	15.485
C18:0	4.7	18
C12:0 ALDE ?	1.8	10.915
unknown 14.503	0.6	14.503
C12:0	0.4	12
C13:0 ISO 2OH	0.3	13.814

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #44749]	1765	-	-	-	-	-	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #44749]	Sample type/isolated from	Human chancroid
[Ref.: #44749]	Sampling date	1954
[Ref.: #44749]	Geographic location (country and/or sea, region)	Hanoï
[Ref.: #44749]	Country	Vietnam
[Ref.: #44749]	Country ISO 3 Code	VNM
[Ref.: #44749]	Continent	Asia

[Ref.: #39281]	Geographic location (country and/or sea, region)	Hanoi
[Ref.: #39281]	Country	Vietnam
[Ref.: #39281]	Country ISO 3 Code	VNM
[Ref.: #39281]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Infection	#Disease	-
#Infection	#Patient	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	[Haemophilus] ducreyi CIP 54.2	GCA_001043455	chromosome	GenBank	730 tax ID	*
[Ref.: #66792]	[Haemophilus] ducreyi CCUG 4438	GCA_002015155	scaffold	GenBank	730 tax ID	*
[Ref.: #66792]	[Haemophilus] ducreyi ATCC 33940	GCA_900109315	contig	GenBank	730 tax ID	*
[Ref.: #66792]	[Haemophilus] ducreyi strain ATCC 33940	730.36	wgs	PATRIC	730 tax ID	*
[Ref.: #66792]	[Haemophilus] ducreyi strain CCUG 4438	730.53	wgs	PATRIC	730 tax ID	*
[Ref.: #66792]	Haemophilus ducreyi ATCC 33940	2597490374	draft	JGI IMG/M	730 tax ID	*

Availability in culture collections External links

[Ref.: #39281]

Culture collection no.

CIP 54.2, ATCC 33940, CCUG 4438, DSM 8925, NCTC 10945, CIP 542

[Ref.: #20218]

Associated Passport(s) in StrainInfo

234010, 125684, 135627, 151418, 135629

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Cultivation	Cytopathic effect of Haemophilus ducreyi for human foreskin cell culture.	Alfa MJ	J Med Microbiol	10.1099/00222615-37-1-43	1992	*
Pathogenicity	Use of dot-immunobinding and immunofluorescence assays to investigate clinically suspected cases of chancroid.	Schalla WO, Sanders LL, Schmid GP, Tam MR, Morse SA	J Infect Dis	10.1093/infdis/153.5.879	1986	*
Pathogenicity	Characterization of the cytopathic effect of Haemophilus ducreyi.	Hollyer TT, DeGagne PA, Alfa MJ	Sex Transm Dis	10.1097/00007435-199409000-00002	1994	*
Pathogenicity	In vitro model of Haemophilus ducreyi adherence to and entry into eukaryotic cells of genital origin.	Lammel CJ, Dekker NP, Palefsky J, Brooks GF	J Infect Dis	10.1093/infdis/167.3.642	1993	*
Enzymology	Organization of the Haemophilus ducreyi 35000 chromosome.	Hobbs MM, Leonardi MJ, Zaretzky FR, Wang TH, Kawula TH	Microbiology (Reading)	10.1099/00221287-142-9-2587	1996	*
Pathogenicity	Haemophilus ducreyi is susceptible to protegrin.	Fortney K, Totten PA, Lehrer RI, Spinola SM	Antimicrob Agents Chemother	10.1128/AAC.42.10.2690	1998	*
Pathogenicity	The effect of temperature on the interaction of Haemophilus ducreyi with human epithelial cells.	Makakole SC, Sturm AW	J Med Microbiol	10.1099/0022-1317-50-5-449	2001	*
Metabolism	Neutrophil degranulation induced by Haemophilus ducreyi.	Odhav B, Hoosen A, Sturm W	Biol Chem	10.1515/BC.2001.100	2001	*
Pathogenicity	Haemophilus ducreyi Outer membrane determinants, including DsrA, define two clonal populations.	White CD, Leduc I, Olsen B, Jeter C, Harris C, Elkins C	Infect Immun	10.1128/IAI.73.4.2387-2399.2005	2005	*
Metabolism	Immunization with the Haemophilus ducreyi hemoglobin receptor HgbA protects against infection in the swine model of chancroid.	Afonina G, Leduc I, Nepluev I, Jeter C, Routh P, Almond G, Orndorff PE, Hobbs M, Elkins C	Infect Immun	10.1128/IAI.74.4.2224-2232.2006	2006	*
	Structurally defined epitopes of Haemophilus ducreyi lipooligosaccharides recognized by monoclonal antibodies.	Ahmed HJ, Frisk A, Mansson JE, Schweda EK, Lagergard T	Infect Immun	10.1128/iai.65.8.3151-3158.1997	1997	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39281 Collection of Institut Pasteur ; Curators of the CIP; CIP 54.2
#44749 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 4438

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68377

Automatically annotated from API NH .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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