Haemophilus ducreyi | Type strain | CIP 54.2, ATCC 33940, CCUG 4438, DSM 8925, NCTC 10945, CIP 542

Strain identifier

BacDive ID: 138208

Type strain:

Species: Haemophilus ducreyi

Culture col. no.: CIP 54.2, ATCC 33940, CCUG 4438, DSM 8925, NCTC 10945, CIP 542

Section

Name and taxonomic classification
Morphology
Culture and growth conditions
Physiology and metabolism
Isolation, sampling and environmental information
Sequence information

External links

Haemophilus ducreyi CIP 54.2 is a microaerophile, mesophilic bacterium of the family Pasteurellaceae.

mesophilic
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Gammaproteobacteria
	Order	Pasteurellales
	Family	Pasteurellaceae
	Genus	Haemophilus
	Species	Haemophilus ducreyi
	Full Scientific Name (PNU)	Haemophilus ducreyi (Neveu-Lemaire 1921) Bergey et al. 1923 (Approved Lists 1980)

Information on morphological and physiological propertiesMorphology

[Ref.: #44749]

Incubation period

2 days

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #39281]

Culture medium

MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria

[Ref.: #39281]

Culture medium growth

[Ref.: #39281]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #39281]			growth	30 ̊C
[Ref.: #44749]			growth	33 ̊C

[Ref.: #39281]	Temperature range	mesophilic
[Ref.: #44749]	Temperature range	mesophilic

Information on physiology and metabolismPhysiology and metabolism

[Ref.: #44749]

Oxygen tolerance

microaerophile

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #44749]

Fatty acid	Percentage	ECL
C16:0	23.8	16
C16:1 ω7c	22.7	15.819
C14:0	18.8	14
C18:2 ω6,9c/C18:0 ANTE	10.9	17.724
C18:1 ω9c	9.9	17.769
C14:0 3OH/C16:1 ISO I	6.2	15.485
C18:0	4.7	18
C12:0 ALDE ?	1.8	10.915
unknown 14.503	0.6	14.503
C12:0	0.4	12
C13:0 ISO 2OH	0.3	13.814

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #44749]	1765	-	-	-	-	-	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #44749]	Sample type/isolated from	Human chancroid
[Ref.: #44749]	Sampling date	1954
[Ref.: #44749]	Geographic location (country and/or sea, region)	Hanoï
[Ref.: #44749]	Country	Vietnam
[Ref.: #44749]	Country ISO 3 Code	VNM
[Ref.: #44749]	Continent	Asia

[Ref.: #39281]	Geographic location (country and/or sea, region)	Hanoi
[Ref.: #39281]	Country	Vietnam
[Ref.: #39281]	Country ISO 3 Code	VNM
[Ref.: #39281]	Continent	Asia

Isolation sources categories

#Host	#Microbial	#Bacteria
#Host Body-Site	#Urogenital tract	-
#Host	#Human	-
#Infection	-	-

What are isolation sources categories?

* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databassSequence information

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	[Haemophilus] ducreyi GHA9	GCA_001647915	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi GHA8	GCA_001647895	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi GHA5	GCA_001647875	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi GHA3	GCA_001647855	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi FDAARGOS_297	GCA_002208665	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi VAN4	GCA_001647765	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi VAN5	GCA_001647795	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi VAN1	GCA_001647655	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi VAN3	GCA_001647735	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi GHA2	GCA_001647835	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi GHA1	GCA_001647815	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi NCTC11483	GCA_900637315	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi VAN2	GCA_001647695	complete	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi CCUG 4438	GCA_002015155	scaffold	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi ATCC 33940	GCA_900109315	contig	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi AUSPNG1	GCA_001465235	contig	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi CIP 54.2	GCA_001043455	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi 6644	GCA_001043335	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi 82-029362	GCA_001043315	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi HMC46	GCA_001043375	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi HD183	GCA_001043355	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi NZS2	GCA_001043195	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi NZS3	GCA_001043235	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi 33921	GCA_001043435	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi NZS4	GCA_001043275	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi NZS1	GCA_001043155	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi DMC64	GCA_001043475	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi HMC56	GCA_001043395	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi NZV1	GCA_001043415	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi DMC111	GCA_001043495	chromosome	GenBank	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain ATCC 33940	730.36	wgs	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain AUSPNG1	730.24	wgs	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain CCUG 4438	730.53	wgs	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class I chancroid strain 1	730.14	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class I chancroid strain 2	730.15	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class I chancroid strain 3	730.16	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class I chancroid strain 4	730.17	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class I chancroid strain 5	730.18	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class II chancroid strain 1	730.21	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class II chancroid strain 2	730.20	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class II chancroid strain 3	730.22	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Class II chancroid strain 4	730.23	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Cutaneous leg ulcer strain 1	730.10	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Cutaneous leg ulcer strain 2	730.11	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Cutaneous leg ulcer strain 3	730.12	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Cutaneous leg ulcer strain 4	730.13	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain Cutaneous leg ulcer strain 5	730.19	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain FDAARGOS_297	730.54	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain GHA1	730.30	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain GHA2	730.31	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain GHA3	730.32	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain GHA5	730.33	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain GHA8	730.34	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain GHA9	730.35	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain VAN1	730.25	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain VAN2	730.26	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain VAN3	730.27	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain VAN4	730.28	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain VAN5	730.29	complete	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain AUSPNG1	730.56	plasmid	PATRIC	730 tax ID
[Ref.: #66792]	[Haemophilus] ducreyi strain NCTC11483	730.57	complete	PATRIC	730 tax ID
[Ref.: #66792]	Haemophilus ducreyi ATCC 33940	2597490374	permanent	JGI IMG/M	730 tax ID

Availability in culture collectionsExternal links

[Ref.: #39281]

Culture collection no.

CIP 54.2, ATCC 33940, CCUG 4438, DSM 8925, NCTC 10945, CIP 542

[Ref.: #20218]

Associated Passport(s) in StrainInfo

234010, 125684, 135627, 151418, 135629

References

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39281 Collection of Institut Pasteur ; Curators of the CIP; CIP 54.2
#44749 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 4438

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

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