Sphingomonas paucimobilis (CIP 102441)

Name: Sphingomonas paucimobilis (CIP 102441)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 138001

Type strain

Culture col. no. CIP 102441

NCBI tax ID(s) 13689

Special Collections CIP

Links

Sphingomonas paucimobilis CIP 102441 is an obligate aerobe, mesophilic, Gram-negative prokaryote of the family Sphingomonadaceae.

Gram-negative motile rod-shaped obligate aerobe mesophilic

Name and taxonomic classification

SI-ID 70266

CIP 102441

@ref 20215

Last LPSN update 2025-12-16 10:02:57

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Sphingomonadaceae

Genus Sphingomonas

Species Sphingomonas paucimobilis

Full scientific name Sphingomonas paucimobilis (Holmes et al. 1977) Yabuuchi et al. 1990

Synonyms (1)

Pseudomonas paucimobilis

BacDive ID	Other strains from **Sphingomonas paucimobilis** (41)	Type strain
14201	S. paucimobilis CL 1/70, DSM 1098, ATCC 29837, NCPPB 3838, ... (type strain)
14202	S. paucimobilis DSM 30198, ATCC 10829, CCM 72, CIP 104977, ...
141280	S. paucimobilis CCUG 573
141286	S. paucimobilis CCUG 635 A
141287	S. paucimobilis CCUG 645 A
141291	S. paucimobilis CCUG 717
141360	S. paucimobilis CCUG 1184
143453	S. paucimobilis CCUG 19310
143602	S. paucimobilis CCUG 20552
143940	S. paucimobilis CCUG 22004
143956	S. paucimobilis CCUG 22042
143957	S. paucimobilis CCUG 22051
143984	S. paucimobilis CCUG 22246
144471	S. paucimobilis CCUG 25090
145185	S. paucimobilis CCUG 27841
145186	S. paucimobilis CCUG 27842
145603	S. paucimobilis CCUG 28962
145614	S. paucimobilis CCUG 28990 A
145782	S. paucimobilis CCUG 29573
145986	S. paucimobilis CCUG 30093
146362	S. paucimobilis CCUG 31037
146637	S. paucimobilis CCUG 31690
146638	S. paucimobilis CCUG 31691
146732	S. paucimobilis CCUG 32037
146931	S. paucimobilis CCUG 32467
149593	S. paucimobilis CCUG 38025
149656	S. paucimobilis CCUG 38134
150646	S. paucimobilis CCUG 41852 B
150651	S. paucimobilis CCUG 41858 A
150677	S. paucimobilis CCUG 41946 A
150680	S. paucimobilis CCUG 41951 A
150719	S. paucimobilis CCUG 42046 A
150725	S. paucimobilis CCUG 42077 C
151240	S. paucimobilis CCUG 43523
155549	S. paucimobilis CCUG 58102
165542	S. paucimobilis JCM 7509, GIFU 2406
165543	S. paucimobilis JCM 7515, CDC B3271, GIFU 2396, IAM 12577, ...
165545	S. paucimobilis JCM 7518, GIFU 2137
165546	S. paucimobilis JCM 7519, GIFU 11386
165548	S. paucimobilis JCM 7521, GIFU 11385
173383	S. paucimobilis CIMB142, CIMB 05-1135, CRBIP17.142

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
38951	negative	rod-shaped

Pigmentation

@ref	Production	Name
38951		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Composition
38951	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
38951	CIP Medium 72
38951	CIP Medium 3

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
38951	positive	growth	30	mesophilic
38951	positive	growth	10-37
38951	negative	growth	5
38951	negative	growth	41

Physiology and metabolism

Oxygen tolerance

38951

Oxygen toleranceobligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
38951	NaCl	positive	growth	0-10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
38951	16947 ChEBI	citrate	-	carbon source
38951	4853 ChEBI	esculin	+	hydrolysis
38951	17632 ChEBI	nitrate	-	reduction
38951	17632 ChEBI	nitrate	-	respiration
38951	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
38951	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
38951	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
38951	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
38951	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
38951	caseinase	-	3.4.21.50
38951	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
38951	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
38951	gelatinase	-
38951	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
38951	lipase	-
68382	lipase (C 14)	-		from API zym
38951	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
38951	ornithine decarboxylase	-	4.1.1.17
38951	oxidase	-
38951	protease	-
68382	trypsin	+	3.4.21.4	from API zym
38951	tryptophan deaminase	-
38951	tween esterase	+
38951	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
38951	-	+	+	+	-	+	+	-	+	+	+	+	-	+	-	+	+	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
38951	not determinedn.d.	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	-	+	+	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	-	-	-	-	+	-	-	+	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	+	+	+	-	-	-	-	+	-	-	+	+	+	-	-	+	+	-	-	+	+

Isolation, sampling and environmental information

Isolation

@ref	Geographic location	Country	Country ISO 3 Code	Continent
38951	Cholet	France	FRA	Europe
38951	Cholet	France	FRA	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
38951	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38951	Collection of Institut Pasteur ; Curators of the CIP; CIP 102441
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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