Tritonibacter mobilis subsp. mobilis (DSM 23403, CIP 109181, MBIC 01146)

Name: Tritonibacter mobilis subsp. mobilis (DSM 23403, CIP 109181, MBIC 01146)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13786

Type strain

Strain Designation N-615G15

Culture col. no. DSM 23403 CIP 109181 MBIC 01146 NBRC 101030 N-615G15

NCBI tax ID(s) 379347

Special Collections DSMZ CIP Literature strains

History <- NBRC; NBRC 101030 <- NBRC, NITE (Natl. Inst. of Technol. and Evaluation), Japan <- H. Izumida, Marine Biotechnol. Inst., Kamaishi, Japan; MBIC 01146 CIP <- 2006, NBRC <- NITE <- MBIC01146 <- H. Izumida, Marine Biotechnol. Inst., Alcaligenes sp.: strain N-615G15

Links

Tritonibacter mobilis subsp. mobilis N-615G15 is an aerobe, Gram-negative, motile bacterium that was isolated from marine slime.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 199626

NBRC 101030,CIP 109181,DSM 23403

@ref 20215

Last LPSN update 2026-02-09 11:21:14

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Roseobacteraceae

Genus Tritonibacter

Species Tritonibacter mobilis subsp. mobilis

Full scientific name Tritonibacter mobilis subsp. mobilis (Muramatsu et al. 2007) Hördt et al. 2020

BacDive ID	Other strains from Tritonibacter mobilis subsp. mobilis (1)	Type strain
13785	T. mobilis subsp. mobilis DSM 23402, KCCM 42378, NBRC 102038, HTCC ...

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
31871	negative	01-02 µm	0.6-0.8 µm	rod-shaped
120987	negative			oval-shaped
125438	negative				98.4
125439	negative				93.2

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
16845	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
37467	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
120987	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
16845	positive	growth	28
31871	positive	growth	05-35
31871	positive	optimum	25-30
37467	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
31871	positive	optimum	7
31871	positive	growth	05-11	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
31871	aerobe
120987	obligate aerobe
125439	aerobe	91.9

Spore formation

@ref	Spore formation	Confidence
125439		95.7

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31871	NaCl	positive	growth	0-10 %
31871	NaCl	positive	optimum	01-03 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31871	22599 ChEBI	arabinose	+	carbon source
31871	28757 ChEBI	fructose	+	carbon source
31871	33984 ChEBI	fucose	+	carbon source
31871	18403 ChEBI	L-arabitol	+	carbon source
31871	29864 ChEBI	mannitol	+	carbon source
120987	17632 ChEBI	nitrate	-	reduction
120987	16301 ChEBI	nitrite	-	reduction
31871	15963 ChEBI	ribitol	+	carbon source
31871	30911 ChEBI	sorbitol	+	carbon source
31871	17151 ChEBI	xylitol	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120987	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120987	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
31871	catalase	+	1.11.1.6
120987	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
31871	cytochrome oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
120987	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120987	ornithine decarboxylase	-	4.1.1.17
120987	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
120987	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120987	-	+	+	+	-	+	+	+	-	-	+	+	-	-	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
16845	marine slime	Ishigaki Island	Japan	JPN	Asia
120987	Environment, Slime, marine environment	Okinawa	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB255401 (>99% sequence identity) for Epibacterium mobile subclade from Microbeatlas

Aquatic Samples	16540
Soil Samples	558
Animal Samples	2089
Plant Samples	125
Total Samples	19312

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16845	1	Risk group (German classification) According to TRBA 466
120987	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3015971v1 assembly for Tritonibacter mobilis NBRC 101030	contig	GCA_030159715	379347.215	8119022878	379347	71.88
66792	IMG-taxon 2693429875 annotated assembly for Tritonibacter mobilis DSM 23403	contig	GCA_900106635	379347.178	2693429875	379347	71.72
66792	ASM168171v1 assembly for Tritonibacter mobilis NBRC101030	contig	GCA_001681715	379347.143	2816332498	379347	67.56

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Ruegeria mobilis strain NBRC 101030 16S ribosomal RNA gene, partial sequence	EU977137	1425	379347
16845	Ruegeria mobilis gene for 16S ribosomal RNA, partial sequence, strain: NBRC 101030	AB255401	1387	379347
124043	Epibacterium mobile strain DSM 23403 16S ribosomal RNA gene, partial sequence.	MW198146	601	379347
124043	Ruegeria mobilis strain NBRC 101030 16S ribosomal RNA gene, partial sequence.	KT989859	1414	379347

GC content

16845

GC-content (mol%)58.5

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Tritonibacter mobilis DSM 23403
NCBI: GCA_900106635

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	95.70	no
125439	motility	BacteriaNetⓘ	yes	63.80	no
125439	gram_stain	BacteriaNetⓘ	negative	93.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	91.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Epibacterium mobile strain DSM 23403
PATRIC: 379347.178

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.40	no
125438	anaerobic	anaerobicⓘ	no	94.26	yes
125438	spore-forming	spore-formingⓘ	no	89.30	no
125438	aerobic	aerobicⓘ	yes	81.13	yes
125438	thermophilic	thermophileⓘ	no	96.27	no
125438	flagellated	motile2+ⓘ	yes	69.79	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria.	Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M.	Front Microbiol	10.3389/fmicb.2020.00468	2020

References

#16845	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23403
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#28131	IJSEM 1304 2007 ( DOI 10.1099/ijs.0.64572-0 , PubMed 17551047 )
#31871	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28131
#37467	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120987	Collection of Institut Pasteur ; Curators of the CIP; CIP 109181
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Tritonibacter mobilis subsp. mobilis (DSM 23403, CIP 109181, MBIC 01146)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_030159715

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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