Shigella boydii (CIP 52.54, NCTC 9333, 6917)

Name: Shigella boydii (CIP 52.54, NCTC 9333, 6917)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137769

Type strain

Strain Designation 6917

Culture col. no. CIP 52.54 NCTC 9333 6917

NCBI tax ID(s) 621

Special Collections CIP

History 1952, Dysentery Ref. Lab., Oxford, UK: strain 6917 CIP <- 1952, Dysentery Ref. Lab., Oxford, UK: strain 6917

Links

Shigella boydii 6917 is a facultative anaerobe, mesophilic, Gram-negative prokaryote that was isolated from Faeces.

Gram-negative rod-shaped facultative anaerobe mesophilic

Name and taxonomic classification

SI-ID 70108

NCTC 9333,CIP 52.54

@ref 20215

Last LPSN update 2026-02-09 11:32:58

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Shigella

Species Shigella boydii

Full scientific name Shigella boydii Ewing 1949 (Approved Lists 1980)

BacDive ID	Other strains from **Shigella boydii** (38)	Type strain
5174	S. boydii P288, DSM 7532, ATCC 8700, CCUG 49022, CIP ... (type strain)
134546	S. boydii 54264, CIP 54.75
134560	S. boydii 75-25-3, CIP 54.108
134619	S. boydii 901, CIP 57.47, NCTC 9356
134723	S. boydii CIP 56.36
134737	S. boydii 4350-54, CIP 58.18, NCTC 9765
134833	S. boydii 258, CIP 73.2
134919	S. boydii 7001, CIP 54.73
135166	S. boydii 2045-54, 425, CIP 58.22, NCTC 9362, CCUG ...
135299	S. boydii 541106, CIP 56.18
135607	S. boydii 2770/51, CIP 58.17, ATCC 12035, NCTC 9766
135608	S. boydii 703, CIP 58.19, ATCC 12034, NCTC 9365
135653	S. boydii 140/56, 5518/56, CIP 67.11
135895	S. boydii D 27, CIP 53.42
135972	S. boydii Nil-2-c, CIP 52.50, NCTC 9329
135996	S. boydii H 21582, CIP 51.6
136410	S. boydii A12, CIP 53.44, NCTC 6721
136484	S. boydii 54125, CIP 54.76
137104	S. boydii 55, CIP 56.35
137108	S. boydii CIP 58.20, NCTC 10024, DRL 120/55
137109	S. boydii 425, CIP 58.21, ATCC 12032, NCTC 9361
137192	S. boydii type, CIP 52.48
137768	S. boydii 426/FA, CIP 52.52, NCTC 9331
138575	S. boydii 1296/7, CIP 51.4, NCTC 9355
138576	S. boydii Congo, CIP 51.3
138591	S. boydii PSH-125, CIP 52.51, NCTC 9330
138593	S. boydii M 279, CIP 52.53, NCTC 9332
138842	S. boydii 592, CIP 58.4
138844	S. boydii 123, CIP 58.23, ATCC 12033, NCTC 9772
138845	S. boydii 1693, CIP 58.24
141992	S. boydii CCUG 9564, NCTC 9357
143796	S. boydii CCUG 21249
143801	S. boydii CCUG 21261
149519	S. boydii CCUG 37891
149520	S. boydii CCUG 37892
149521	S. boydii CCUG 37893
151867	S. boydii CCUG 45096
171284	S. boydii CIP 111949

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
38706	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
38706	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
38706	CIP Medium 72		Medium recipe at CIP
38706	CIP Medium 3		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
38706	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

38706

Oxygen tolerancefacultative anaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
38706	17632 ChEBI	nitrate	+	reduction
38706	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
38706	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
38706	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
38706	oxidase	-
68382	trypsin	+	3.4.21.4	from API zym
38706	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
38706	-	+	-	-	-	+	+	-	+	-	+	+	-	-	+	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
38706	not determinedn.d.	+/-	-	+/-	+	-	+	-	-	-	+	+	+	+	-	-	-	-	+	+	-	-	+	-	-	-	-	-	-	-	+	-	+/-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-

Isolation, sampling and environmental information

Isolation

38706

Sample typeFaeces

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
38706	2	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Selection and validation of a multilocus variable-number tandem-repeat analysis panel for typing Shigella spp.	Gorge O, Lopez S, Hilaire V, Lisanti O, Ramisse V, Vergnaud G.	J Clin Microbiol	10.1128/jcm.02027-07	2008

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38706	Collection of Institut Pasteur ; Curators of the CIP; CIP 52.54
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Shigella boydii (CIP 52.54, NCTC 9333, 6917)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite production

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome-based predictions

Literature

Literature

References

BacDive

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