Azospirillum lipoferum | Type strain | CCUG 56042, NCIMB 11861, LMG 13128, CCM 3863, JCM 1247, CIP 106280, ATCC 29707, DSM 1691, NCAIM B.01801

Strain identifier

BacDive ID: 137718

Type strain:

Species: Azospirillum lipoferum

Culture col. no.: CCUG 56042, NCIMB 11861, LMG 13128, CCM 3863, JCM 1247, CIP 106280, ATCC 29707, DSM 1691, NCAIM B.01801

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #38613]	Domain	Bacteria
[Ref.: #38613]	Phylum	Proteobacteria
[Ref.: #38613]	Class	Alphaproteobacteria
[Ref.: #38613]	Family	Rhodospirillaceae
[Ref.: #38613]	Genus	Azospirillum
[Ref.: #38613]	Species	Azospirillum lipoferum
[Ref.: #38613]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	20-11-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Alphaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Rhodospirillaceae		Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Genus	Azospirillum	genus (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Species	Azospirillum lipoferum	comb. nov. (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Full Scientific Name	Azospirillum lipoferum (Beijerinck 1925) Tarrand et al. 1979

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #43272]	Gram stain	negative
[Ref.: #43272]	Cell length	1.1-1.4 µm
[Ref.: #43272]	Cell width	0.4-0.6 µm
[Ref.: #43272]	Cell shape	rod-shaped
[Ref.: #43272]	Motility	no

[Ref.: #43272]	Colony color	yellow
[Ref.: #43272]	Colony shape	circular
[Ref.: #43272]	Incubation period	2 days
[Ref.: #43272]	Cultivation medium used	R2A

	Enzyme	Enzyme activity	EC number
[Ref.: #43272]	acid phosphatase	+	3.1.3.2
[Ref.: #43272]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43272]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #43272]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43272]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43272]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43272]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43272]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43272]	beta-galactosidase	-	3.2.1.23
[Ref.: #43272]	beta-glucosidase	+	3.2.1.21
[Ref.: #43272]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43272]	catalase	+	1.11.1.6
[Ref.: #43272]	cystine arylamidase	+	3.4.11.3
[Ref.: #43272]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43272]	esterase (C 4)	+
[Ref.: #43272]	esterase Lipase (C 8)	+
[Ref.: #43272]	leucine arylamidase	+	3.4.11.1
[Ref.: #43272]	lipase (C 14)	-
[Ref.: #43272]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43272]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43272]	trypsin	+	3.4.21.4
[Ref.: #43272]	urease	-	3.5.1.5
[Ref.: #43272]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Type of FA analysis

whole cell analysis

Incubation medium

R2A

Agar/liquid

liquid

Incubation temperature (°C)

Incubation time (d)

Incubation pH

Incubation oxygen condition

Treatment/condition

Software version

Sherlock 6.0B

Library/peak naming table

System

MIS MIDI

Instrument

Method/protocol

Cutoff value

0.00

Reference

[Ref.: #43272]

Fatty acid	Percentage
C16:0	0.9
C14:1ω5c	0.5
C15:1ω8c	1.1
anteiso-C17:1ω9c	1.9
iso-C13:0	1.5
iso-C14:0	6.8
iso-C15:0	33.5
anteiso-C15:0	8.6
iso-C15:1 F	7.6
iso-C16:0	2.9
iso-C16:1 H	1
C12:0 3-OH	2
C13:0 2-OH	1
iso-C14:0 3-OH	0.5
C15:0 2-OH	0.7
iso-C15:0 3-OH	4.2
C16:0 3-OH	0.8
iso-C16:0 3-OH	6.7
C17:0 2-OH	0.7
iso-C17:0 3-OH	7.9
iso-C15:1 H / C13:0 3-OH	1.6
C16:1ω7c / C16:1ω6c	6.7

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43272]		NaCl		growth	0-1	%(w/v)
[Ref.: #43272]		NaCl		optimum	0	%

	Metabolite production	Metabolite	Production
[Ref.: #43272]		Indole	yes

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43272]	2,3-Butanediol	-	respiration
[Ref.: #43272]	2-Hydroxybutyric acid	-	respiration
[Ref.: #43272]	2-Oxobutanoic acid	-	respiration
[Ref.: #43272]	2-Oxoglutaric acid	-	respiration
[Ref.: #43272]	2-Oxovaleric acid	-	respiration
[Ref.: #43272]	3-Hydroxybutyric acid	-	respiration
[Ref.: #43272]	4-Hydroxy-L-proline	+	respiration
[Ref.: #43272]	4-Hydroxybutyric acid	-	respiration
[Ref.: #43272]	4-Hydroxyphenylacetic acid	-	respiration
[Ref.: #43272]	Acetic acid	+	respiration
[Ref.: #43272]	Adipic acid	-	assimilation
[Ref.: #43272]	Adonitol	-	respiration
[Ref.: #43272]	alpha-Cyclodextrin	-	respiration
[Ref.: #43272]	alpha-D-Glucose	-	respiration
[Ref.: #43272]	alpha-D-Lactose	-	respiration
[Ref.: #43272]	Bromosuccinic acid	-	respiration
[Ref.: #43272]	Capric acid	-	assimilation
[Ref.: #43272]	cis-Aconitic acid	-	respiration
[Ref.: #43272]	Citric acid	-	respiration
[Ref.: #43272]	D-Alanine	-	respiration
[Ref.: #43272]	D-Arabitol	-	respiration
[Ref.: #43272]	D-Cellobiose	-	respiration
[Ref.: #43272]	D-Fructose	-	respiration
[Ref.: #43272]	D-Galactonic acid lactone	-	respiration
[Ref.: #43272]	D-Galactose	-	respiration
[Ref.: #43272]	D-Galacturonic acid	-	respiration
[Ref.: #43272]	D-Glucaric acid	-	respiration
[Ref.: #43272]	D-Gluconic acid	-	respiration
[Ref.: #43272]	D-Glucosaminic acid	-	respiration
[Ref.: #43272]	D-Glucose	+	assimilation
[Ref.: #43272]	D-Glucose	-	fermentation
[Ref.: #43272]	D-Glucose 6-phosphate	-	respiration
[Ref.: #43272]	D-Glucuronic acid	-	respiration
[Ref.: #43272]	D-Maltose	+	assimilation
[Ref.: #43272]	D-Mannitol	-	assimilation
[Ref.: #43272]	D-Mannitol	-	respiration
[Ref.: #43272]	D-Mannose	+	assimilation
[Ref.: #43272]	D-Mannose	-	respiration
[Ref.: #43272]	D-Psicose	-	respiration
[Ref.: #43272]	D-Serine	-	respiration
[Ref.: #43272]	D-Sorbitol	-	respiration
[Ref.: #43272]	Dextrin	-	respiration
[Ref.: #43272]	DL-Carnitine	-	respiration
[Ref.: #43272]	DL-Lactate	-	respiration
[Ref.: #43272]	Erythritol	-	respiration
[Ref.: #43272]	Esculin	+	hydrolysis
[Ref.: #43272]	Ethanolamine	-	respiration
[Ref.: #43272]	Formic acid	-	respiration
[Ref.: #43272]	gamma-Aminobutyric acid	-	respiration
[Ref.: #43272]	Gelatin	-	hydrolysis
[Ref.: #43272]	Gentiobiose	-	respiration
[Ref.: #43272]	Glucose 1-phosphate	-	respiration
[Ref.: #43272]	Glucuronamide	-	respiration
[Ref.: #43272]	Glycerol	-	respiration
[Ref.: #43272]	Glycerol 1-phosphate	-	respiration
[Ref.: #43272]	Glycogen	+	respiration
[Ref.: #43272]	Glycyl L-Aspartic acid	-	respiration
[Ref.: #43272]	Inosine	-	respiration
[Ref.: #43272]	Itaconic acid	-	respiration
[Ref.: #43272]	L-Alaninamide	-	respiration
[Ref.: #43272]	L-Alanine	-	respiration
[Ref.: #43272]	L-alanylglycine	-	respiration
[Ref.: #43272]	L-Arabinose	-	assimilation
[Ref.: #43272]	L-Arabinose	-	respiration
[Ref.: #43272]	L-Asparagine	-	respiration
[Ref.: #43272]	L-Aspartic acid	+	respiration
[Ref.: #43272]	L-Fucose	-	respiration
[Ref.: #43272]	L-Glutamic acid	+	respiration
[Ref.: #43272]	L-Histidine	-	respiration
[Ref.: #43272]	L-Leucine	-	respiration
[Ref.: #43272]	L-Ornithine	+	respiration
[Ref.: #43272]	L-Phenylalanine	-	respiration
[Ref.: #43272]	L-Proline	+	respiration
[Ref.: #43272]	L-Pyroglutamic acid	-	respiration
[Ref.: #43272]	L-Rhamnose	-	respiration
[Ref.: #43272]	L-Serine	+	respiration
[Ref.: #43272]	L-Threonine	-	respiration
[Ref.: #43272]	Lactulose	-	respiration
[Ref.: #43272]	Malic acid	-	assimilation
[Ref.: #43272]	Malonic acid	-	respiration
[Ref.: #43272]	Maltose	-	respiration
[Ref.: #43272]	Melibiose	-	respiration
[Ref.: #43272]	methyl beta-D-glucopyranoside	-	respiration
[Ref.: #43272]	Methyl pyruvate	+	respiration
[Ref.: #43272]	Monomethyl succinate	+	respiration
[Ref.: #43272]	myo-Inositol	-	respiration
[Ref.: #43272]	N-Acetylgalactosamine	-	respiration
[Ref.: #43272]	N-Acetylglucosamine	-	assimilation
[Ref.: #43272]	N-Acetylglucosamine	-	respiration
[Ref.: #43272]	N-Glycyl-L-glutamic acid	-	respiration
[Ref.: #43272]	Nitrate	-	reduction
[Ref.: #43272]	Phenylacetic acid	-	assimilation
[Ref.: #43272]	Phenylethylamine	-	respiration
[Ref.: #43272]	Potassium gluconate	-	assimilation
[Ref.: #43272]	Propionic acid	-	respiration
[Ref.: #43272]	Putrescine	-	respiration
[Ref.: #43272]	Quinic acid	-	respiration
[Ref.: #43272]	Raffinose	-	respiration
[Ref.: #43272]	Sebacic acid	-	respiration
[Ref.: #43272]	Sodium citrate	-	assimilation
[Ref.: #43272]	Succinamic acid	-	respiration
[Ref.: #43272]	Succinic acid	-	respiration
[Ref.: #43272]	Sucrose	-	respiration
[Ref.: #43272]	Thymidine	-	respiration
[Ref.: #43272]	Trehalose	-	respiration
[Ref.: #43272]	Turanose	-	respiration
[Ref.: #43272]	Tween 40	-	hydrolysis
[Ref.: #43272]	Tween 40	-	respiration
[Ref.: #43272]	Tween 80	-	hydrolysis
[Ref.: #43272]	Tween 80	-	respiration
[Ref.: #43272]	Uridine	-	respiration
[Ref.: #43272]	Urocanic acid	-	respiration
[Ref.: #43272]	Xylitol	-	respiration
	Only first 10 entries are displayed. Click here to see all.

[Ref.: #43272]

Oxygen tolerance

facultative anaerobe

[Ref.: #43272]	Pigmentation color	yellow
[Ref.: #43272]	Pigment name	carotenoid-type pigments
[Ref.: #43272]	Pigment name	flexirubin-type pigments

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #38613]

Culture medium

MEDIUM 321 - for Azospirillum lipoferum

[Ref.: #38613]

Culture medium growth

[Ref.: #38613]

Culture medium composition

expand / minimize

[Ref.: #43272]

Culture medium

R2A

[Ref.: #43272]

Culture medium growth

[Ref.: #43272]

Culture medium

[Ref.: #43272]

Culture medium growth

[Ref.: #43272]

Culture medium

[Ref.: #43272]

Culture medium growth

		Temperature
[Ref.: #38613]	growth	30 ̊C
[Ref.: #43272]	optimum	37 ̊C
[Ref.: #43272]	growth	20-40 ̊C

[Ref.: #38613]	Temperature range	mesophilic
[Ref.: #43272]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43272]			optimum	7
[Ref.: #43272]			growth	6.6-8.2

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #43272]

Sample type/isolated from

activated sludge of a wastewater treatment plant

[Ref.: #43272]

Geographic location (country and/or sea, region)

Busan, South Korea

[Ref.: #43272]

Country

Republic of Korea

[Ref.: #43272]

Continent

Asia

[Ref.: #43272]

Geographic location

35.0000°/129.0000°

[Ref.: #60842]

Sample type/isolated from

Roots,wheat

[Ref.: #38613]

Geographic location (country and/or sea, region)

Rio de Janeiro

[Ref.: #38613]

Country

Brazil

[Ref.: #38613]

Continent

Middle and South America

Isolation sources categories

#Engineered	#Waste	#Activated sludge
#Engineered	#Waste	#Water treatment plant

What are isolation sources categories?

* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #43272]

GC-content

31.5 mol%

Thermal denaturation, fluorometry

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #43272]	GenBank/EMBL/DDBJ	16S rRNA gene sequences	KY031327	16S	1458	2004710

Availability in culture collectionsStrain availability

[Ref.: #38613]

Culture collection no.

CCUG 56042, NCIMB 11861, LMG 13128, CCM 3863, JCM 1247, CIP 106280, ATCC 29707, DSM 1691, NCAIM B.01801

[Ref.: #20218]

Associated Passport(s) in StrainInfo

148670, 30676, 148671, 148672

References

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#38613 Collection of Institut Pasteur ; Curators of the CIP; CIP 106280

#43272

Byung Hee Chun, Yunhee Lee, Hyun Mi Jin and Che Ok Jeon: Cloacibacterium caeni sp. nov., isolated from activated sludge. IJSEM 67: 1688 - 1692 2017 ( DOI 10.1099/ijsem.0.001841 )

#60842 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56042
* These References are textmined

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