Roseinatronobacter monicus (DSM 18423, UNIQEM U251, VKM B-2404)

Name: Roseinatronobacter monicus (DSM 18423, UNIQEM U251, VKM B-2404)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13755

Type strain

Culture col. no. DSM 18423 UNIQEM U251 VKM B-2404 ROS 35

NCBI tax ID(s) 393481

Special Collections DSMZ

History <- E. N. Boldareva; ROS 35

Links

Roseinatronobacter monicus DSM 18423 is a bacterium that was isolated from hypersaline water.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 362846

DSM 18423,VKM B-2404

@ref 20215

Last LPSN update 2026-02-09 11:21:14

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Paracoccaceae

Genus Roseinatronobacter

Species Roseinatronobacter monicus

Full scientific name Roseinatronobacter monicus Boldareva et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	99
125439	negative	96.5

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7548	ROSEINATRONOBACTER MONICUS MEDIUM (DSMZ Medium 1218)		Medium recipe at MediaDive	Name: ROSEINATRONOBACTER MONICUS MEDIUM (DSMZ Medium 1218) Composition: NaCl 40.0 g/l NaHCO3 10.0 g/l Na2CO3 5.0 g/l Yeast extract 1.0 g/l Na2S2O3 x 5 H2O 1.0 g/l Sodium pyruvate 1.0 g/l Sodium acetate 1.0 g/l Peptone 1.0 g/l KCl 0.5 g/l Na2SO4 0.5 g/l KH2PO4 0.5 g/l NH4Cl 0.4 g/l NaNO3 0.4 g/l MgCl2 x 6 H2O 0.2 g/l FeCl2 x 4 H2O 0.00149254 g/l MnCl2 x 4 H2O 0.000199005 g/l CoCl2 x 6 H2O 0.000189055 g/l ZnCl2 6.96517e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Vitamin B12 1e-05 g/l H3BO3 5.97015e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l HCl Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7548	positive	growth	25

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	90.1

Spore formation

@ref	Spore formation	Confidence
125438		93.306
125439		97.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Condition	#Saline	-
#Environmental	#Aquatic	#Non-marine Saline and Alkaline

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7548	hypersaline water	California, Mono Lake	USA	USA	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7548	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM671686v1 assembly for Roseinatronobacter monicus DSM 18423	contig	GCA_006716865	393481.3	2818991432	393481	76.79

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7548	Roseinatronobacter monicus strain ROS 35 16S ribosomal RNA gene, partial sequence	DQ659236	1450		393481
124043	Roseinatronobacter monicus strain DSM 18423 16S ribosomal RNA gene, partial sequence.	MK598754	1389		393481

GC content

7548

GC-content (mol%)59

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Roseinatronobacter monicus DSM 18423
NCBI: GCA_006716865

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	97.60	no
125439	motility	BacteriaNetⓘ	yes	59.80	no
125439	gram_stain	BacteriaNetⓘ	negative	96.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	90.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Roseinatronobacter monicus strain DSM 18423
PATRIC: 393481.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	no
125438	anaerobic	anaerobicⓘ	no	84.87	no
125438	spore-forming	spore-formingⓘ	no	93.31	no
125438	aerobic	aerobicⓘ	yes	79.00	no
125438	thermophilic	thermophileⓘ	no	97.01	no
125438	flagellated	motile2+ⓘ	yes	55.13	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Biodiversity and culture of prokaryotes inhabiting haloalkaline and meromictic Soap Lake, Washington, USA.	Vanderlaan OJM, Simmons EM, Damman KM, Waddell MD, Ross SF, Armstrong AD, Walker ML, Sattley SJ, Sattley WM.	Front Microbiol	10.3389/fmicb.2025.1620605	2025
Genetics	Ecological Interactions of Cyanobacteria and Heterotrophs Enhances the Robustness of Cyanobacterial Consortium for Carbon Sequestration.	Ataeian M, Liu Y, Kouris A, Hawley AK, Strous M.	Front Microbiol	10.3389/fmicb.2022.780346	2022
Enzymology	Distribution and origin of oxygen-dependent and oxygen-independent forms of Mg-protoporphyrin monomethylester cyclase among phototrophic proteobacteria.	Boldareva-Nuianzina EN, Blahova Z, Sobotka R, Koblizek M.	Appl Environ Microbiol	10.1128/aem.00104-13	2013
	Composition and Activity of Microbial Communities along the Redox Gradient of an Alkaline, Hypersaline, Lake.	Edwardson CF, Edwardson CF, Hollibaugh JT.	Front Microbiol	10.3389/fmicb.2018.00014	2018
	Genome-based analysis of the family Paracoccaceae and description of Ostreiculturibacter nitratireducens gen. nov., sp. nov., isolated from an oyster farm on a tidal flat.	Huang Z, Li M, Oren A, Lai Q.	Front Microbiol	10.3389/fmicb.2024.1376777	2024
Phylogeny	[Rhodobaculum claviforme gen. nov., sp. nov., a New Alkaliphilic Nonsulfur Purple Bacterium].	Bryantseva IA, Gaisin VA, Gorlenko VM	Mikrobiologiia		2015
Phylogeny	[The new bacteriochlorophyll a-containing bacterium Roseinatronobacter monicus sp. nov. from the hypersaline soda Mono Lake (California, United States)].	Boldareva EN, Briantseva IA, Tsapin A, Nelson K, Sorokin DIu, Turova TP, Boichenko VA, Stadnichuk IN, Gorlenko VM	Mikrobiologiia		2007

References

#7548	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18423
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Roseinatronobacter monicus (DSM 18423, UNIQEM U251, VKM B-2404)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_006716865

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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