Chryseobacterium hominis (CIP 100127, 183.83)

Name: Chryseobacterium hominis (CIP 100127, 183.83)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137441

Type strain

Strain Designation 183.83

Culture col. no. CIP 100127 183.83

NCBI tax ID(s) 420404

Special Collections CIP

Links

Chryseobacterium hominis 183.83 is a mesophilic prokaryote of the family Weeksellaceae.

mesophilic

Name and taxonomic classification

SI-ID 67830

CIP 100127

@ref 20215

Last LPSN update 2025-12-16 10:02:49

Domain Pseudomonadati

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Weeksellaceae

Genus Chryseobacterium

Species Chryseobacterium hominis

Full scientific name Chryseobacterium hominis Vaneechoutte et al. 2007

Synonyms (2)

Chryseobacterium arothri
Epilithonimonas hominis

BacDive ID	Other strains from **Chryseobacterium hominis** (24)	Type strain
5695	C. hominis P2K6, DSM 19326, CIP 109575 (type strain)
5696	C. hominis NF802, DSM 22165, CCUG 52711, CIP 109415 (type strain)
5697	C. hominis E12, DSM 30866
135380	C. hominis 231.83, CIP 100155
135601	C. hominis CIP 57.36
135919	C. hominis 670.83, CIP 100379
138650	C. hominis 902.83, CIP 100546
139172	C. hominis 129.84, CIP 100724
139227	C. hominis 556.80, CIP 103053
142669	C. hominis CCUG 13649
142838	C. hominis CCUG 15261
146230	C. hominis CCUG 30664
149029	C. hominis CCUG 36747
149030	C. hominis CCUG 36748
153262	C. hominis CCUG 48966
153900	C. hominis CCUG 51561
154193	C. hominis CCUG 52708
154194	C. hominis CCUG 52709
154195	C. hominis CCUG 52710
154196	C. hominis CCUG 52712
154197	C. hominis CCUG 52713
154198	C. hominis CCUG 52714
154199	C. hominis CCUG 52715
157191	C. hominis CCUG 70346

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
37961	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
37961	CIP Medium 72		Medium recipe at CIP
37961	CIP Medium 3		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
37961	positive	growth	30	mesophilic

Physiology and metabolism

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	vitamin K metabolism	100	5 of 5
66794	glycogen metabolism	100	5 of 5
66794	kanosamine biosynthesis II	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	formaldehyde oxidation	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	sulfopterin metabolism	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	acetate fermentation	100	4 of 4
66794	folate polyglutamylation	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	palmitate biosynthesis	95.45	21 of 22
66794	vitamin B1 metabolism	92.31	12 of 13
66794	starch degradation	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	gluconeogenesis	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	threonine metabolism	80	8 of 10
66794	propionate fermentation	80	8 of 10
66794	peptidoglycan biosynthesis	80	12 of 15
66794	cellulose degradation	80	4 of 5
66794	heme metabolism	78.57	11 of 14
66794	lipid A biosynthesis	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	valine metabolism	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	d-mannose degradation	77.78	7 of 9
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	NAD metabolism	72.22	13 of 18
66794	cysteine metabolism	72.22	13 of 18
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	citric acid cycle	71.43	10 of 14
66794	glutamate and glutamine metabolism	71.43	20 of 28
66794	leucine metabolism	69.23	9 of 13
66794	phenylalanine metabolism	69.23	9 of 13
66794	purine metabolism	67.02	63 of 94
66794	acetoin degradation	66.67	2 of 3
66794	flavin biosynthesis	66.67	10 of 15
66794	pyrimidine metabolism	66.67	30 of 45
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	alanine metabolism	65.52	19 of 29
66794	histidine metabolism	65.52	19 of 29
66794	methionine metabolism	65.38	17 of 26
66794	glycolysis	64.71	11 of 17
66794	tyrosine metabolism	64.29	9 of 14
66794	vitamin B6 metabolism	63.64	7 of 11
66794	pentose phosphate pathway	63.64	7 of 11
66794	glycine betaine biosynthesis	60	3 of 5
66794	methylglyoxal degradation	60	3 of 5
66794	lysine metabolism	59.52	25 of 42
66794	non-pathway related	57.89	22 of 38
66794	propanol degradation	57.14	4 of 7
66794	glutathione metabolism	57.14	8 of 14
66794	d-xylose degradation	54.55	6 of 11
66794	tryptophan metabolism	52.63	20 of 38
66794	lipid metabolism	51.61	16 of 31
66794	ethanol fermentation	50	1 of 2
66794	carnitine metabolism	50	4 of 8
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	Entner Doudoroff pathway	50	5 of 10
66794	ketogluconate metabolism	50	4 of 8
66794	phenylmercury acetate degradation	50	1 of 2
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	isoprenoid biosynthesis	46.15	12 of 26
66794	sulfate reduction	46.15	6 of 13
66794	proline metabolism	45.45	5 of 11
66794	carotenoid biosynthesis	45.45	10 of 22
66794	oxidative phosphorylation	43.96	40 of 91
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	arginine metabolism	41.67	10 of 24
66794	arachidonate biosynthesis	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	lipoate biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	urea cycle	38.46	5 of 13
66794	metabolism of disaccharids	36.36	4 of 11
66794	degradation of pentoses	35.71	10 of 28
66794	sphingosine metabolism	33.33	2 of 6
66794	arachidonic acid metabolism	33.33	6 of 18
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	IAA biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	ascorbate metabolism	31.82	7 of 22
66794	degradation of sugar alcohols	31.25	5 of 16
66794	androgen and estrogen metabolism	31.25	5 of 16
66794	4-hydroxyphenylacetate degradation	30	3 of 10
66794	mevalonate metabolism	28.57	2 of 7
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	3-phenylpropionate degradation	26.67	4 of 15
66794	butanoate fermentation	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	biotin biosynthesis	25	1 of 4
66794	polyamine pathway	21.74	5 of 23

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
37961		Le Mans	France	FRA	Europe
37961	Human, Neck abscess	Le Mans	France	FRA	Europe	1983

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
37961	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#37961	Collection of Institut Pasteur ; Curators of the CIP; CIP 100127
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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