Name: Rhodovulum adriaticum BN 721(6II)
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13739

Type strain:

Species: Rhodovulum adriaticum

Strain Designation: BN 721(6II)

Culture col. no.: DSM 2781, ATCC 35885

Strain history: <- J.F. Imhoff, strain BN 721(6II)

NCBI tax ID(s): 35804 (species)

SI-ID 41351

ATCC 35885, DSM 2781

Section

Rhodovulum adriaticum BN 721 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from malo Jezero on Mljet.

Gram-negative
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Rhodovulum*
	Species	**Rhodovulum adriaticum**
	Full Scientific Name (LPSN)	Rhodovulum adriaticum (Neutzling et al. 1984) Hiraishi and Ueda 1994

	Synonym	Rhodopseudomonas adriatica
	Synonym	Rhodobacter adriaticus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.998

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1223]

Culture medium

RHODOBACTER ADRIATICUS MEDIUM (DSMZ Medium 351)

[Ref.: #1223]

Culture medium growth

[Ref.: #1223]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1223]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1223]			growth	30 °C

[Ref.: #1223]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1223]

Oxygen tolerance

anaerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %98
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.937

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1223]	Sample type/isolated from	malo Jezero on Mljet
[Ref.: #1223]	Geographic location (country and/or sea, region)	Adriatic Sea
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Lake (large)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence D16418 (>99% sequence identity) for Rhodovulum adriaticum subclade from Microbeatlas

Aquatic Samples	598
Soil Samples	10
Animal Samples	14
Plant Samples	5
Total Samples	627

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1223]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Rhodovulum adriaticum 16S rRNA	D13476	1351	ENA	35804 tax ID	*
[Ref.: #20218]	Rhodovulum adriaticum gene for 16S rRNA	D16418	1389	ENA	35804 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Rhodovulum adriaticum DSM 2781	GCA_004345735	scaffold	GenBank	35804 tax ID	*
[Ref.: #66792]	Rhodovulum adriaticum DSM 2781	GCA_016583705	scaffold	GenBank	35804 tax ID	*
[Ref.: #66792]	Rhodovulum adriaticum strain DSM 2781	35804.6	wgs	PATRIC	35804 tax ID	*
[Ref.: #66792]	Rhodovulum adriaticum strain DSM 2781	35804.4	wgs	PATRIC	35804 tax ID	*
[Ref.: #66792]	Rhodovulum adriaticum DSM 2781	2795385465	draft	JGI IMG/M	35804 tax ID	*

[Ref.: #1223]

GC-content

66.7 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Rhodovulum adriaticum DSM 2781 NCBI: GCA_004345735.1
[Ref.: #69481]	spore-forming	no	98	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Rhodovulum adriaticum DSM 2781 NCBI: GCA_004345735.1
[Ref.: #69480]	motile	yes	62.927	no
[Ref.: #69480]	flagellated	no	81.019	no
[Ref.: #69480]	gram-positive	no	99.035	no
[Ref.: #69480]	anaerobic	yes	87.907	yes
[Ref.: #69480]	aerobic	no	93.347	yes
[Ref.: #69480]	halophile	yes	63.362	no
[Ref.: #69480]	spore-forming	no	95.912	no
[Ref.: #69480]	glucose-util	yes	53.288	no
[Ref.: #69480]	thermophile	no	92.784	yes
[Ref.: #69480]	glucose-ferment	no	90.536	no

Availability in culture collections External links

[Ref.: #1223]

Culture collection no.

DSM 2781, ATCC 35885

[Ref.: #82921]

SI-ID 41351

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rhodovulum bhavnagarense sp. nov., a phototrophic alphaproteobacterium isolated from a pink pond.	Srinivas A, Rahul K, Ramaprasad EVV, Sasikala C, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijs.0.036152-0	2011	*

References

#1223

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2781

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#82921

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID41351.1 )

* These data were automatically processed and therefore are not curated

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Rhodovulum adriaticum DSM 2781

Rhodovulum adriaticum DSM 2781

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