Name: Sporosarcina saromensis HG645
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 137388

Type strain:

Species: Sporosarcina saromensis

Strain Designation: HG645

Culture col. no.: CIP 109742, IAM 15429, JCM 23205, MBIC 08270, KCTC 13119, NBRC 103571, BCRC 80072

Strain history: CIP <- 2007, KCTC <- S.Y. An, Tokyo, Univ., Tokyo, Japan: strain HG645

NCBI tax ID(s): 359365 (species)

SI-ID 309505

IAM 15429, KCTC 13119, JCM 23205, NBRC 103571, CIP 109742

Section

Sporosarcina saromensis HG645 is an aerobe, mesophilic, motile bacterium that was isolated from Surface water in Lake Saroma.

motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Sporosarcina*
	Species	**Sporosarcina saromensis**
	Full Scientific Name (LPSN)	Sporosarcina saromensis An et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive
[Ref.: #37660]	Gram stain	positive

[Ref.: #37660]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #37660]	Motility	yes
[Ref.: #67771]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #37660]

Culture medium

Marine agar (MA)

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

CIP Medium 72

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

CIP Medium 13

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Culture medium growth

[Ref.: #37660]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #37660]	growth	30 °C
[Ref.: #67770]	growth	25 °C
[Ref.: #67771]	growth	27 °C

[Ref.: #37660]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

[Ref.: #67770]	Observation	quinones: MK-7
[Ref.: #67771]	Observation	quinones: MK-7

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #37660]		nitrate ChEBI	-	reduction
[Ref.: #37660]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #37660]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #37660]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #37660]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #37660]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #37660]	12079	-	-	+	+	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Surface water in Lake Saroma
[Ref.: #67770]	Geographic location (country and/or sea, region)	Hokkaido
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia

[Ref.: #37660]	Sample type/isolated from	Fishery, sediment
[Ref.: #37660]	Geographic location (country and/or sea, region)	Miyagi
[Ref.: #37660]	Country	Japan
[Ref.: #37660]	Country ISO 3 Code	JPN
[Ref.: #37660]	Continent	Asia
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67771]	Sporosarcina saromensis rrs gene for 16S rRNA, partial sequence, strain: HG645	AB243859	1504	ENA	359365 tax ID

[Ref.: #67771]	GC-content	46.0 mol%
[Ref.: #67770]	GC-content	46 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #37660]

Culture collection no.

CIP 109742, IAM 15429, JCM 23205, MBIC 08270, KCTC 13119, NBRC 103571, BCRC 80072

[Ref.: #94297]

SI-ID 309505

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sporosarcina saromensis sp. nov., an aerobic endospore-forming bacterium.	An SY, Haga T, Kasai H, Goto K, Yokota A	Int J Syst Evol Microbiol	10.1099/ijs.0.64962-0	2007	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#37660 Collection of Institut Pasteur ; Curators of the CIP; CIP 109742
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68382

Automatically annotated from API zym .

#94297

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID309505.1 )

* These data were automatically processed and therefore are not curated

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