Name: Rubrivivax benzoatilyticus CIP 109386
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 137373

Type strain:

Species: Rubrivivax benzoatilyticus

Culture col. no.: CIP 109386, JCM 13220, ATCC BAA 35, MTCC 7087

Strain history: Ch. Sasikala JA2.

NCBI tax ID(s): 316997 (species)

Section

Rubrivivax benzoatilyticus CIP 109386 is a mesophilic bacterium of the family Comamonadaceae.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Rubrivivax*
	Species	**Rubrivivax benzoatilyticus**
	Full Scientific Name (PNU)	Rubrivivax benzoatilyticus Ramana et al. 2006

Information on culture and growth conditions Culture and growth conditions

[Ref.: #37538]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37538]

Culture medium growth

[Ref.: #37538]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #37538]			growth	30 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #37538]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Rhizosphere of a flooded paddy field near Eluru
[Ref.: #67770]	Geographic location (country and/or sea, region)	Andhra Pradesh
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia

[Ref.: #37538]	Geographic location (country and/or sea, region)	Andhra Pradesh
[Ref.: #37538]	Country	India
[Ref.: #37538]	Country ISO 3 Code	IND
[Ref.: #37538]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AJ888903 (>99% sequence identity) for Rubrivivax from Microbeatlas

Aquatic Samples	17
Soil Samples	4
Animal Samples	15
Plant Samples	1
Total Samples	37

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Rubrivivax benzoatilyticus 16S rRNA gene, type strain JA2T	AJ888903	1492	ENA	987059 tax ID

[Ref.: #67770]

GC-content

74.9 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #37538]

Culture collection no.

CIP 109386, JCM 13220, ATCC BAA 35, MTCC 7087

[Ref.: #20218]

Associated Passport(s) in StrainInfo

803106

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rubrivivax benzoatilyticus sp. nov., an aromatic, hydrocarbon-degrading purple betaproteobacterium.	Ramana CV, Sasikala C, Arunasri K, Anil Kumar P, Srinivas TNR, Shivaji S, Gupta P, Suling J, Imhoff JF	Int J Syst Evol Microbiol	10.1099/ijs.0.64209-0	2006	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37538 Collection of Institut Pasteur ; Curators of the CIP; CIP 109386
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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