Name: Campylobacter helveticus CIP 104877
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 137358

Type strain:

Species: Campylobacter helveticus

Culture col. no.: CIP 104877, NCTC 12470, ATCC 51209, CCUG 30682

Strain history: CIP <- 1996, J. Stanley, Cent. Pub. Hlth. Lab., London, UK <- A.P. Burnens, Berne Univ., Switzerland

NCBI tax ID(s): 28898 (species)

SI-ID 7661

LMG 12638, ATCC 51209, CCUG 30682, LMG 19528, NCTC 12470, CIP 104877

Other strains from Campylobacter helveticus

C. helveticus CCUG 30563
C. helveticus CCUG 30564
C. helveticus CCUG 30565
C. helveticus CCUG 30566
C. helveticus CCUG 30683, NCTC 12471
C. helveticus CCUG 34016
C. helveticus CCUG 34042
C. helveticus CCUG 34055
C. helveticus CCUG 34068
C. helveticus CCUG 34092
C. helveticus CCUG 34119
C. helveticus CCUG 54661

Section

Campylobacter helveticus CIP 104877 is a microaerophile, mesophilic, Gram-negative bacterium of the family Campylobacteraceae.

Gram-negative
mesophilic
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Campylobacteraceae*
	Genus	*Campylobacter*
	Species	**Campylobacter helveticus**
	Full Scientific Name (LPSN)	Campylobacter helveticus Stanley et al. 1993

Information on morphological and physiological properties Morphology

[Ref.: #37366]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.992

[Ref.: #37366]	Cell shape	rod-shaped

[Ref.: #37366]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #37366]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #37366]

Culture medium growth

[Ref.: #37366]

Culture medium composition

expand / minimize

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Culture medium

CIP Medium 6

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #37366]		growth	37 °C
[Ref.: #37366]		growth	37-41 °C
[Ref.: #37366]	no	growth	5 °C
[Ref.: #37366]	no	growth	10 °C
[Ref.: #37366]	no	growth	25 °C
[Ref.: #37366]	no	growth	30 °C
[Ref.: #37366]	no	growth	45 °C
[Ref.: #50216]		growth	37 °C

[Ref.: #37366]	Temperature range	mesophilic
[Ref.: #37366]	Temperature range	psychrophilic
[Ref.: #37366]	Temperature range	mesophilic
[Ref.: #37366]	Temperature range	thermophilic
[Ref.: #50216]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #50216]

Oxygen tolerance

microaerophile

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.995

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #37366]		NaCl	no	growth	3.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #37366]	hippurate ChEBI	-	hydrolysis
[Ref.: #37366]	nitrate ChEBI	+	reduction
[Ref.: #37366]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #37366]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #37366]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #37366]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #37366]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #37366]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #37366]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #37366]	8268	-	-	+	+	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #50216]	Sample type/isolated from	Cat feces
[Ref.: #50216]	Sampling date	1992
[Ref.: #50216]	Country	Switzerland
[Ref.: #50216]	Country ISO 3 Code	CHE
[Ref.: #50216]	Continent	Europe

[Ref.: #37366]	Sample type/isolated from	Animal, Cat
[Ref.: #37366]	Country	Switzerland
[Ref.: #37366]	Country ISO 3 Code	CHE
[Ref.: #37366]	Continent	Europe
[Ref.: #37366]	Isolation date	1992

[Ref.: #37366]	Country	Switzerland
[Ref.: #37366]	Country ISO 3 Code	CHE
[Ref.: #37366]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Felidae (Cat)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Campylobacter helveticus NCTC 12470	2808606797	draft	JGI IMG/M	28898 tax ID	*
[Ref.: #66792]	Campylobacter helveticus NCTC12470	GCA_900446405	contig	GenBank	28898 tax ID	*
[Ref.: #66792]	Campylobacter helveticus ATCC 51209	GCA_900176295	scaffold	GenBank	28898 tax ID	*
[Ref.: #66792]	Campylobacter helveticus strain ATCC 51209	28898.33	plasmid	PATRIC	28898 tax ID	*
[Ref.: #66792]	Campylobacter helveticus strain ATCC 51209	28898.35	plasmid	PATRIC	28898 tax ID	*
[Ref.: #66792]	Campylobacter helveticus strain ATCC 51209	28898.34	plasmid	PATRIC	28898 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Campylobacter helveticus ATCC 51209 NCBI: GCA_002080395.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Campylobacter helveticus ATCC 51209 NCBI: GCA_002080395.1
[Ref.: #69480]	flagellated	yes	57.893	no
[Ref.: #69480]	gram-positive	no	98.691	no
[Ref.: #69480]	anaerobic	no	87.907	no
[Ref.: #69480]	aerobic	no	98.069	yes
[Ref.: #69480]	halophile	no	86.219	no
[Ref.: #69480]	spore-forming	no	96.809	no
[Ref.: #69480]	glucose-util	no	87.031	no
[Ref.: #69480]	thermophile	no	77.645	no
[Ref.: #69480]	motile	yes	91.466	no
[Ref.: #69480]	glucose-ferment	no	83.779	no

Availability in culture collections External links

[Ref.: #37366]

Culture collection no.

CIP 104877, NCTC 12470, ATCC 51209, CCUG 30682

[Ref.: #94279]

SI-ID 7661

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Campylobacter cuniculorum sp. nov., from rabbits.	Zanoni RG, Debruyne L, Rossi M, Revez J, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.007286-0	2009	*
Genetics	Complete Genome Sequence of the Campylobacter helveticus Type Strain ATCC 51209.	Miller WG, Yee E, Bono JL	Genome Announc	10.1128/genomeA.00398-17	2017	*
Phylogeny	Two types of 16S rRNA gene are found in Campylobacter helveticus: analysis, applications and characterization of the intervening sequence found in some strains.	Linton D, Dewhirst FE, Clewley JP, Owen RJ, Burnens AP, Stanley J	Microbiology (Reading)	10.1099/00221287-140-4-847	1994	*
Phylogeny	Campylobacter helveticus sp. nov., a new thermophilic species from domestic animals: characterization, and cloning of a species-specific DNA probe.	Stanley J, Burnens AP, Linton D, On SL, Costas M, Owen RJ	J Gen Microbiol	10.1099/00221287-138-11-2293	1992	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#37366 Collection of Institut Pasteur ; Curators of the CIP; CIP 104877
#50216 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30682

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#94279

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7661.1 )

* These data were automatically processed and therefore are not curated

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Campylobacter helveticus ATCC 51209

Campylobacter helveticus ATCC 51209

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