Shigella flexneri 3591-52 is a facultative anaerobe, Gram-negative, rod-shaped bacterium of the family Enterobacteriaceae.
Gram-negative rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria
SI-ID 4970
| @ref 20215 |
|
Last LPSN update
2026-02-09 11:32:51 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Shigella |
| Species Shigella flexneri |
| Full scientific name Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980) |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 96.1 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 37166 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68374 | 18333 ChEBI | D-arabitol | - | builds acid from | from API ID32E |
| 68374 | 18024 ChEBI | D-galacturonic acid | + | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | - | builds acid from | from API ID32E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68374 | 16899 ChEBI | D-mannitol | - | builds acid from | from API ID32E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 37166 | 17234 ChEBI | glucose | + | fermentation | |
| 68374 | 30849 ChEBI | L-arabinose | - | builds acid from | from API ID32E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68374 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API ID32E |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 37166 | 17716 ChEBI | lactose | + | fermentation | |
| 68374 | 25094 ChEBI | lysine | - | degradation | from API ID32E |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 37166 | 15792 ChEBI | malonate | - | assimilation | |
| 68374 | 17306 ChEBI | maltose | - | builds acid from | from API ID32E |
| 37166 | 29864 ChEBI | mannitol | - | fermentation | |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 37166 | 17632 ChEBI | nitrate | - | reduction | |
| 37166 | 16301 ChEBI | nitrite | - | reduction | |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68374 | Potassium 5-ketogluconate | - | builds acid from | from API ID32E | |
| 68374 | 15963 ChEBI | ribitol | - | builds acid from | from API ID32E |
| 37166 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68374 | 17992 ChEBI | sucrose | - | builds acid from | from API ID32E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68374 | 27082 ChEBI | trehalose | + | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | - | energy source | from API ID32E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68374 | 16199 ChEBI | urea | - | hydrolysis | from API ID32E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 37166 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 37166 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68374 | alpha-galactosidase | + | 3.2.1.22 | from API ID32E |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 37166 | beta-galactosidase | - | 3.2.1.23 | |
| 68374 | beta-galactosidase | - | 3.2.1.23 | from API ID32E |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68374 | beta-glucosidase | - | 3.2.1.21 | from API ID32E |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68374 | beta-glucuronidase | - | 3.2.1.31 | from API ID32E |
| 37166 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 37166 | gelatinase | - | ||
| 68368 | gelatinase | - | from API 20E | |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68374 | lipase | - | from API ID32E | |
| 68382 | lipase (C 14) | - | from API zym | |
| 37166 | lysine decarboxylase | - | 4.1.1.18 | |
| 68374 | lysine decarboxylase | - | 4.1.1.18 | from API ID32E |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 37166 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 37166 | oxidase | - | ||
| 37166 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 37166 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 37166 | urease | - | 3.5.1.5 | |
| 68374 | urease | - | 3.5.1.5 | from API ID32E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 |   |
|
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | |
|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | |
|
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | |
|
| 66794 | 4-hydroxyphenylacetate degradation | 100 | 10 of 10 | |
|
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | |
|
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | |
|
| 66794 | taurine degradation | 100 | 1 of 1 | |
|
| 66794 | adipate degradation | 100 | 2 of 2 | |
|
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | |
|
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | |
|
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | |
|
| 66794 | starch degradation | 100 | 10 of 10 | |
|
| 66794 | biotin biosynthesis | 100 | 4 of 4 | |
|
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | |
|
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | |
|
| 66794 | acetate fermentation | 100 | 4 of 4 | |
|
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | |
|
| 66794 | tetrahydrofolate metabolism | 100 | 14 of 14 | |
|
| 66794 | folate polyglutamylation | 100 | 1 of 1 | |
|
| 66794 | ubiquinone biosynthesis | 100 | 7 of 7 | |
|
| 66794 | sulfoquinovose degradation | 100 | 3 of 3 | |
|
| 66794 | gluconeogenesis | 100 | 8 of 8 | |
|
| 66794 | vitamin K metabolism | 100 | 5 of 5 | |
|
| 66794 | palmitate biosynthesis | 95.45 | 21 of 22 | |
|
| 66794 | NAD metabolism | 94.44 | 17 of 18 | |
|
| 66794 | heme metabolism | 92.86 | 13 of 14 | |
|
| 66794 | glutathione metabolism | 92.86 | 13 of 14 | |
|
| 66794 | photosynthesis | 92.86 | 13 of 14 | |
|
| 66794 | vitamin B6 metabolism | 90.91 | 10 of 11 | |
|
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | |
|
| 66794 | Entner Doudoroff pathway | 90 | 9 of 10 | |
|
| 66794 | threonine metabolism | 90 | 9 of 10 | |
|
| 66794 | valine metabolism | 88.89 | 8 of 9 | |
|
| 66794 | serine metabolism | 88.89 | 8 of 9 | |
|
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | |
|
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | |
|
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | |
|
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | |
|
| 66794 | degradation of sugar alcohols | 87.5 | 14 of 16 | |
|
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | |
|
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | |
|
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | |
|
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | |
|
| 66794 | purine metabolism | 82.98 | 78 of 94 | |
|
| 66794 | gallate degradation | 80 | 4 of 5 | |
|
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | |
|
| 66794 | glycogen metabolism | 80 | 4 of 5 | |
|
| 66794 | metabolism of amino sugars and derivatives | 80 | 4 of 5 | |
|
| 66794 | pyrimidine metabolism | 80 | 36 of 45 | |
|
| 66794 | alanine metabolism | 79.31 | 23 of 29 | |
|
| 66794 | glutamate and glutamine metabolism | 78.57 | 22 of 28 | |
|
| 66794 | citric acid cycle | 78.57 | 11 of 14 | |
|
| 66794 | aspartate and asparagine metabolism | 77.78 | 7 of 9 | |
|
| 66794 | d-mannose degradation | 77.78 | 7 of 9 | |
|
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | |
|
| 66794 | urea cycle | 76.92 | 10 of 13 | |
|
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | |
|
| 66794 | lactate fermentation | 75 | 3 of 4 | |
|
| 66794 | dTDPLrhamnose biosynthesis | 75 | 6 of 8 | |
|
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | |
|
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | |
|
| 66794 | flavin biosynthesis | 73.33 | 11 of 15 | |
|
| 66794 | oxidative phosphorylation | 72.53 | 66 of 91 | |
|
| 66794 | degradation of sugar acids | 72 | 18 of 25 | |
|
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | |
|
| 66794 | lipid metabolism | 70.97 | 22 of 31 | |
|
| 66794 | glycolysis | 70.59 | 12 of 17 | |
|
| 66794 | leucine metabolism | 69.23 | 9 of 13 | |
|
| 66794 | non-pathway related | 68.42 | 26 of 38 | |
|
| 66794 | degradation of pentoses | 67.86 | 19 of 28 | |
|
| 66794 | allantoin degradation | 66.67 | 6 of 9 | |
|
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | |
|
| 66794 | cyanate degradation | 66.67 | 2 of 3 | |
|
| 66794 | octane oxidation | 66.67 | 2 of 3 | |
|
| 66794 | selenocysteine biosynthesis | 66.67 | 4 of 6 | |
|
| 66794 | methane metabolism | 66.67 | 2 of 3 | |
|
| 66794 | acetoin degradation | 66.67 | 2 of 3 | |
|
| 66794 | tryptophan metabolism | 65.79 | 25 of 38 | |
|
| 66794 | isoprenoid biosynthesis | 65.38 | 17 of 26 | |
|
| 66794 | proline metabolism | 63.64 | 7 of 11 | |
|
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | |
|
| 66794 | methionine metabolism | 61.54 | 16 of 26 | |
|
| 66794 | degradation of hexoses | 61.11 | 11 of 18 | |
|
| 66794 | hydrogen production | 60 | 3 of 5 | |
|
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | |
|
| 66794 | propanol degradation | 57.14 | 4 of 7 | |
|
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | |
|
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | |
|
| 66794 | phenol degradation | 55 | 11 of 20 | |
|
| 66794 | arginine metabolism | 54.17 | 13 of 24 | |
|
| 66794 | sulfate reduction | 53.85 | 7 of 13 | |
|
| 66794 | 3-phenylpropionate degradation | 53.33 | 8 of 15 | |
|
| 66794 | lysine metabolism | 52.38 | 22 of 42 | |
|
| 66794 | histidine metabolism | 51.72 | 15 of 29 | |
|
| 66794 | carnitine metabolism | 50 | 4 of 8 | |
|
| 66794 | myo-inositol biosynthesis | 50 | 5 of 10 | |
|
| 66794 | toluene degradation | 50 | 2 of 4 | |
|
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | |
|
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | |
|
| 66794 | propionate fermentation | 50 | 5 of 10 | |
|
| 66794 | quinate degradation | 50 | 1 of 2 | |
|
| 66794 | butanoate fermentation | 50 | 2 of 4 | |
|
| 66794 | ethanol fermentation | 50 | 1 of 2 | |
|
| 66794 | cis-vaccenate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | tyrosine metabolism | 50 | 7 of 14 | |
|
| 66794 | polyamine pathway | 47.83 | 11 of 23 | |
|
| 66794 | ascorbate metabolism | 45.45 | 10 of 22 | |
|
| 66794 | d-xylose degradation | 45.45 | 5 of 11 | |
|
| 66794 | metabolism of disaccharids | 45.45 | 5 of 11 | |
|
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | |
|
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | |
|
| 66794 | coenzyme M biosynthesis | 40 | 4 of 10 | |
|
| 66794 | glycine metabolism | 40 | 4 of 10 | |
|
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | |
|
| 66794 | phosphatidylethanolamine bioynthesis | 38.46 | 5 of 13 | |
|
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | |
|
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | methanogenesis from CO2 | 33.33 | 4 of 12 | |
|
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | |
|
| 66794 | vitamin B12 metabolism | 32.35 | 11 of 34 | |
|
| 66794 | androgen and estrogen metabolism | 31.25 | 5 of 16 | |
|
| 66794 | arachidonic acid metabolism | 27.78 | 5 of 18 | |
|
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | |
Metadata FA analysis  | ||||||||||||||||||||||||||||||||||||||||||||||
| @ref | 50816 | |||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50816 | - | - | - | - | - | - | - | - | - | + | - | + | + | - | - | - | - | - | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50816 | - | - | - | - | - | + | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 58075_G01 assembly for Shigella flexneri NCTC12698 | contig | GCA_900457225   | 623.1086  | 623 | 74.88 | | |
| 66792 | SFC assembly for Shigella flexneri ATCC 12022 | scaffold | GCA_000754175 | 623.156 | 2609460125  | 623 | 36.93 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Microencapsulated Lactiplantibacillus plantarum ZGP-Lpl.19 modulates growth and virulence gene expression of Shigella flexneri ATCC 12022 in vitro. | Ghorbani Z, Shayestehpour M, Shahaboddin ME, Khaledi A, Karimi M, Maleki R, Motallebi M. | Naunyn Schmiedebergs Arch Pharmacol | 10.1007/s00210-025-04623-9 | 2025 | | |
| Prevalence of pathogenic bacteria and their antimicrobial patterns analysis of clinical samples from free-range chickens raised in forest farms in Zhouqu county of Gansu Province, China. | Egide H, Zhang J, Wang L, Xu G, Zhang K, Yang Y, Zhang G, Alfred N, Claudious G, Gu X, Guo Z, Zhang P, Li J. | Poult Sci | 10.1016/j.psj.2025.105859 | 2025 | | |
| Pathogenicity | Shigella sonnei and Shigella flexneri infection in Caenorhabditis elegans led to species-specific regulatory responses in the host and pathogen. | Wong BC, Tan HS. | Microb Genom | 10.1099/mgen.0.001339 | 2025 | |
| Antibacterial Activity, GC MS Analysis and In Silico Validation of Bioactive Compound from Endophytic Fungus Lasiodiplodia pseudotheobromae EF-9. | Kavitha K, Yuvaraj U, Rajalakshmi A, Suresh G, Harini M, Prabakaran V, Bharathi S, Puvanakrishnan R, Ramesh B. | Chem Biodivers | 10.1002/cbdv.202401448 | 2025 | | |
| Prebiotic potential of oligosaccharides extracted from improved Ugandan varieties of millet, sesame, soybean, and sorghum: enhancing probiotic growth and enteric pathogen inhibition. | Alowo D, Olum S, Mukisa IM, Ongeng D. | BMC Microbiol | 10.1186/s12866-025-04028-x | 2025 | | |
| Isolation, characterization, therapeutic and prophylactic applications of a lytic bacteriophage to combat multi-drug resistance Shigella flexneri: an animal study model. | Abbasi Fashami P, Pournajaf A, Amirmozafari N, Hallajzadeh M, Mahabadi VP, Saghiri R, Khafri S, Golmoradi Zadeh R, Akrami S, Asgharzadeh S, Rajabnia M. | GMS Hyg Infect Control | 10.3205/dgkh000543 | 2025 | | |
| Pathogenicity | Production of highly immunogenic and safe Triton X-100 produced bacterial ghost vaccine against Shigella flexneri 2b serotype. | Abdelfattah A, Samir R, Amin HM. | Gut Pathog | 10.1186/s13099-023-00568-7 | 2023 | |
| An RPA-Based CRISPR/Cas12a Assay in Combination with a Lateral Flow Assay for the Rapid Detection of Shigella flexneri in Food Samples. | Xu J, Zhang T, Lv X, Shi L, Bai W, Ye L. | Foods | 10.3390/foods13193200 | 2024 | | |
| Biotechnology | Evaluation of Food-Grade Additives on the Viability of Ten Shigella flexneri Phages in Food to Improve Safety in Agricultural Products. | Tomat D, Casabonne C, Aquili V, Quiberoni A. | Viruses | 10.3390/v17040474 | 2025 | |
| Physicochemical characterization of ten newly isolated phages against the foodborne pathogen Shigella flexneri | Tomat D, Gonzalez A, Aquili V, Casabonne C, Quiberoni A. | Journal of food processing and preservation. | 2022 | | ||
| Identification and Characterization of New Hafnia Strains from Common Carp (Cyprinus carpio), Potentially Possessing Probiotic Properties and Plastic Biodegradation Capabilities. | Dragacevic L, Tsibulskaya D, Kojic M, Rajic N, Niksic A, Popovic M. | Int J Mol Sci | 10.3390/ijms26031119 | 2025 | | |
| Screening, isolation, identification and evaluation of bacteria with probiotic potential from traditional palmyra palm nectar. | Kanimozhi R, Sangavi R, Malligarjunan N, Gowrishankar S. | Front Cell Infect Microbiol | 10.3389/fcimb.2025.1685639 | 2025 | | |
| Probiotic potential of enterococcus lactis in improving egg production and quality in quails during late egg-laying period. | Liu L, Liu C, Wang H, Tang H, Chen Z, Dou X, Chang J, Li Z, Wang Z, Mei Y, Ren M. | Poult Sci | 10.1016/j.psj.2025.104765 | 2025 | | |
| Pathogenicity | Nutritional, Antibacterial and Thrombolytic Prospects of Freshwater Paludomas conica Protein Hydrolysate and Its Anti-Inflammatory Potential in LPS-Induced RAW 264.7 Macrophage Cells. | Siddique TA, Rafi KJ, Akter S, Bithy FY, Aktar R, Khan AN, Majid M, Sultana F, Saha S, Ahmed AMA, Rahman A. | Food Sci Nutr | 10.1002/fsn3.4711 | 2025 | |
| Production and Antibacterial Activity of Atypical Siderophore from Pseudomonas sp. QCS59 Recovered from Harpachene schimperi. | Almuhawish MA, Kotb E, Alkhaldi E, Ahmed AA. | Pharmaceuticals (Basel) | 10.3390/ph17091126 | 2024 | | |
| Simultaneous detection of seven bacterial pathogens transmitted by flies using the reverse line blot hybridization assay. | Ma Y, Niu Q, Sun X, Li Y, Gou H, Wang Z, Song B. | Parasit Vectors | 10.1186/s13071-024-06170-3 | 2024 | | |
| Pharmaco-Toxicological Effects of Cachrys libanotis Extract: Antioxidant, Antimicrobial, and Cytotoxic Activities in Human Cell Lines and Embryonic Models. | Fucile M, Macasoi IG, Negrea M, Obistioiu D, Marrelli M, Alexa E, Dehelean C, Statti G, Conforti F, Pinzaru I. | Antioxidants (Basel) | 10.3390/antiox14070810 | 2025 | | |
| The Fascinating Cross-Paths of Pathogenic Bacteria, Human and Animal Faecal Sources in Water-Stressed Communities of Vhembe District, South Africa. | Mudau M, Ngobeni-Nyambi R, Momba MNB. | Pathogens | 10.3390/pathogens12091085 | 2023 | | |
| Comparative analysis of solvent and advanced extraction techniques for optimizing phytochemical yield and bioactivity of Matthiola ovatifolia (Boiss.) Aerial parts. | Sharifi-Rad M, Camele I, Pohl P, Mohanta YK, Elshafie HS. | Sci Rep | 10.1038/s41598-025-23565-z | 2025 | | |
| Enzymology | Impact of UV-C Irradiation on Bacterial Disinfection in a Drinking Water Purification System. | Kim HJ, Yoon HW, Lee MA, Kim YH, Lee CJ. | J Microbiol Biotechnol | 10.4014/jmb.2211.11027 | 2023 | |
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| Microwave-assisted solvent-free synthesis and in vitro antibacterial screening of quinoxalines and pyrido[2, 3b]pyrazines. | Morales-Castellanos JJ, Ramirez-Hernandez K, Gomez-Flores NS, Rodas-Suarez OR, Peralta-Cruz J. | Molecules | 10.3390/molecules17055164 | 2012 | | |
| Higher Levels of Secretory IgA Are Associated with Low Disease Activity Index in Patients with Reactive Arthritis and Undifferentiated Spondyloarthritis. | Salas-Cuestas F, Bautista-Molano W, Bello-Gualtero JM, Arias I, Castillo DM, Chila-Moreno L, Valle-Onate R, Herrera D, Romero-Sanchez C. | Front Immunol | 10.3389/fimmu.2017.00476 | 2017 | | |
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| Chemical profiling of coriander, garlic and their combination to highlight the synergistic effect of the profiled compounds through in vitro and in vivo bioassays. | Boujbiha MA, Chahdoura H, Ziani BEC, Hsouna AB, Snoussi M, M'hadheb MB, Bachari K, Selmi B, Kacaniova M, Mnif W, Flamini G, Mosbah H. | Food Sci Nutr | 10.1002/fsn3.4384 | 2025 | | |
| Chemical Composition, Antibacterial and Anti-Quorum Sensing Activities of Pimenta dioica L. Essential Oil and Its Major Compound (Eugenol) against Foodborne Pathogenic Bacteria. | ALrashidi AA, Noumi E, Snoussi M, Feo V. | Plants (Basel) | 10.3390/plants11040540 | 2022 | | |
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| Exploring the Antibacterial Activity of Pestalotiopsis spp. under Different Culture Conditions and Their Chemical Diversity Using LC-ESI-Q-TOF-MS. | Aguilar-Perez MM, Torres-Mendoza D, Vasquez R, Rios N, Cubilla-Rios L. | J Fungi (Basel) | 10.3390/jof6030140 | 2020 | | |
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| Antimicrobial Potential and Phytochemical Profile of Wild and Cultivated Populations of Thyme (Thymus sp.) Growing in Western Romania. | Beicu R, Alexa E, Obistioiu D, Cocan I, Imbrea F, Pop G, Circioban D, Moisa C, Lupitu A, Copolovici L, Copolovici DM, Imbrea IM | Plants (Basel) | 10.3390/plants10091833 | 2021 | | |
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| Enzymology | Antibacterial, antifungal and antioxidant activities of the ethanol extract of the stem bark of Clausena heptaphylla. | Fakruddin M, Mannan KS, Mazumdar RM, Afroz H | BMC Complement Altern Med | 10.1186/1472-6882-12-232 | 2012 | |
| Biotechnology | Viable but nonculturable state of foodborne pathogens in grapefruit juice: a study of laboratory. | Nicolo MS, Gioffre A, Carnazza S, Platania G, Silvestro ID, Guglielmino SP | Foodborne Pathog Dis | 10.1089/fpd.2009.0491 | 2010 | |
| Cultivation | The effectiveness of triclosan-incorporated plastic against bacteria on beef surfaces. | Cutter CN | J Food Prot | 10.4315/0362-028x-62.5.474 | 1999 | |
| The Antibacterial Effects of Cocktail and Single Forms of Lytic Phages Belonging to Podoviridae and Myoviridae Families from Sewage against Shigella sonnei and Shigella flexneri. | Jokar J, Rahimian N, Ghasemian A, Najafipour S | Biomed Res Int | 10.1155/2022/7833565 | 2022 | | |
| Antibacterial Activity of Thymoquinone Against Shigella flexneri and Its Effect on Biofilm Formation. | Wang M, Zhan X, Ma X, Wang R, Guo D, Zhang Y, Yu J, Chang Y, Lu X, Shi C | Foodborne Pathog Dis | 10.1089/fpd.2022.0056 | 2022 | | |
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| Transcriptome | Burkholderia paludis sp. nov., an Antibiotic-Siderophore Producing Novel Burkholderia cepacia Complex Species, Isolated from Malaysian Tropical Peat Swamp Soil. | Ong KS, Aw YK, Lee LH, Yule CM, Cheow YL, Lee SM. | Front Microbiol | 10.3389/fmicb.2016.02046 | 2016 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive137262.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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