Name: Paracoccus bogoriensis BOG6
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13721

Type strain:

Species: Paracoccus bogoriensis

Strain Designation: BOG6

Culture col. no.: DSM 16578, LMG 22798

Strain history: <- P. Golyshin, HZI, Braunschweig, Germany; BOG6 <- G. Osanjo, School of Pharmacy, University of Nairobi

NCBI tax ID(s): 242065 (species)

Section

Paracoccus bogoriensis BOG6 is a mesophilic Proteobacterium that was isolated from hot spring.

mesophilic
16S sequence
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #6512]	Domain	Bacteria
[Ref.: #6512]	Phylum	Proteobacteria
[Ref.: #6512]	Class	Alphaproteobacteria
[Ref.: #6512]	Order	Rhodobacterales
[Ref.: #6512]	Family	Rhodobacteraceae
[Ref.: #6512]	Genus	Paracoccus
[Ref.: #6512]	Species	Paracoccus bogoriensis
[Ref.: #6512]	Full Scientific Name	Paracoccus bogoriensis Osanjo et. al.
[Ref.: #6512]	Strain Designation	BOG6
[Ref.: #6512]	Type strain

Information on culture and growth conditions Culture and growth conditions

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Culture medium

PARACOCCUS BOGORIENSIS MEDIUM (DSMZ Medium 1325)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6512]			growth	37 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6512]	Sample type/isolated from	hot spring
[Ref.: #6512]	Geographic location (country and/or sea, region)	Lake Bogoria (0° 22'S and 36° 05'E)
[Ref.: #6512]	Country	Kenya
[Ref.: #6512]	Country ISO 3 Code	KEN
[Ref.: #6512]	Continent	Africa
[Ref.: #6512]	Geographic location	-0.3667°/36.0833°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6512]	Paracoccus sp. BOG6 partial 16S rRNA gene, isolate BOG6	AJ580352	1385	ENA	242065 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paracoccus bogoriensis strain BOG6	242065.3	wgs	PATRIC	242065 tax ID	*

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GC-content

66.7 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paracoccus bogoriensis strain BOG6 PATRIC: 242065.3
[Ref.: #69480]	motile	no	71.056	no
[Ref.: #69480]	gram-positive	no	97.717	no
[Ref.: #69480]	anaerobic	no	96.532	no
[Ref.: #69480]	aerobic	yes	82.33	no
[Ref.: #69480]	halophile	yes	57.424	no
[Ref.: #69480]	spore-forming	no	95.373	no
[Ref.: #69480]	glucose-util	yes	85.168	no
[Ref.: #69480]	flagellated	no	90.045	no
[Ref.: #69480]	thermophile	no	78.585	yes
[Ref.: #69480]	glucose-ferment	no	87.625	no

Availability in culture collections External links

[Ref.: #6512]

Culture collection no.

DSM 16578, LMG 22798

References

#6512

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16578

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Paracoccus bogoriensis strain BOG6

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