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Strain identifier

BacDive ID: 13693

Type strain: Yes

Species: Paracoccus denitrificans

Culture col. no.: CCUG 30144, LMG 4049, LMG 4219, IFO 13301, DSM 413, ATCC 17741, ATCC 19367, CCM 982, LMD 22.21, NCIB 8944, JCM 21484, IAM 15021, NBRC 102528, NCCB 22021

Strain history: IAM 15021 <-- NCCB 22021 <-- LMD 22.21 <-- M. W. Beijerinck.

NCBI tax ID(s): 1302247 (strain), 266 (species)

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Paracoccus denitrificans CCUG 30144 is an aerobe, mesophilic bacterium that was isolated from Soil,garden.

  1. aerobe
  2. mesophilic
  3. 16S sequence
  4. Bacteria
  5. genome sequence
  • Information on physiology and metabolism Physiology and metabolismarrow_down
  • [Ref.: #49937] Oxygen tolerance aerobe
    [Ref.: #20216] Observation Degradation of creatine
    Fatty acid profile
    Metadata FA analysis
    Type of FA analysis whole cell analysis
    Incubation medium
    Agar/liquid
    Incubation temperature (°C)
    Incubation time (d)
    Incubation pH
    Incubation oxygen condition
    Treatment/condition
    Software version
    Library/peak naming table
    System
    Instrument
    Method/protocol CCUG
    Cutoff value
    Reference [Ref.: #49937]
    Fatty acidarrow to sort Percentagearrow to sort ECLarrow to sort
    C18:1 ω7c /12t/9t 72.3
    17.824
    C16:0 13.2
    16
    C18:0 4.5
    18
    C10:0 3OH 2.7
    11.423
    unknown 11.798 2.5
    11.798
    C19:0 CYCLO ω8c 1.9
    18.9
    Unidentified 1.6
    16.297
    C14:0 3OH/C16:1 ISO I 1.2
    15.485
    C17:0 0.9
    17

  • Availability in culture collections External linksarrow_down
  • [Ref.: #186] Culture collection no. CCUG 30144, LMG 4049, LMG 4219, IFO 13301, DSM 413, ATCC 17741, ATCC 19367, CCM 982, LMD 22.21, NCIB 8944, JCM 21484, IAM 15021, NBRC 102528, NCCB 22021
    [Ref.: #20218] Associated Passport(s) in StrainInfo 16103, 16114, 16100, 16101, 235066, 16110
    Literature: Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries.
    Topicarrow to sort Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort
    Enzymology Cytochrome c' of Paracoccus denitrificans. Gilmour R, Goodhew CF, Pettigrew GW Biochim Biophys Acta 10.1016/s0005-2728(05)80208-7 1991 *
    Enzymology The regulation of hydrogenase formation as a differentiating character of strains of Paracoccus denitrificans. Nokhal TH, Schlegel HG Antonie Van Leeuwenhoek 10.1007/BF00444069 1980 *
    Genetics Integration of heterologous DNA into the genome of Paracoccus denitrificans is mediated by a family of IS1248-related elements and a second type of integrative recombination event. Van Spanning RJ, Reijnders WN, Stouthamer AH J Bacteriol 10.1128/jb.177.16.4772-4778.1995 1995 *
    Metabolism The surface-charge asymmetry and dimerisation of cytochrome c550 from Paracoccus denitrificans--implications for the interaction with cytochrome c peroxidase. Pettigrew GW, Gilmour R, Goodhew CF, Hunter DJ, Devreese B, Van Beeumen J, Costa C, Prazeres S, Krippahl L, Palma PN, Moura I, Moura JJ Eur J Biochem 10.1046/j.1432-1327.1998.2580559.x 1998 *
    Phylogeny A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov. Rainey FA, Kelly DP, Stackebrandt E, Burghardt J, Hiraishi A, Katayama Y, Wood AP Int J Syst Bacteriol 10.1099/00207713-49-2-645 1999 *
    Biotechnology Production of ubiquinone-10 using bacteria. Yoshida H, Kotani Y, Ochiai K, Araki K J Gen Appl Microbiol 10.2323/jgam.44.19 1998 *
    Phylogeny Paracoccus yeeii sp. nov. (formerly CDC group EO-2), a novel bacterial species associated with human infection. Daneshvar MI, Hollis DG, Weyant RS, Steigerwalt AG, Whitney AM, Douglas MP, Macgregor JP, Jordan JG, Mayer LW, Rassouli SM, Barchet W, Munro C, Shuttleworth L, Bernard K J Clin Microbiol 10.1128/JCM.41.3.1289-1294.2003 2003 *
    Enzymology A novel enzyme, D-3-hydroxyaspartate aldolase from Paracoccus denitrificans IFO 13301: purification, characterization, and gene cloning. Liu JQ, Dairi T, Itoh N, Kataoka M, Shimizu S Appl Microbiol Biotechnol 10.1007/s00253-003-1238-2 2003 *
    Enzymology Growth and nitrite and nitrous oxide accumulation of Paracoccus denitrificans ATCC 19367 in the presence of selected pesticides. Saez F, Pozo C, Gomez MA, Rodelas B, Gonzalez-Lopez J Environ Toxicol Chem 10.1897/02-351 2003 *
    Metabolism Potential role of nitrite for abiotic Fe(II) oxidation and cell encrustation during nitrate reduction by denitrifying bacteria. Klueglein N, Zeitvogel F, Stierhof YD, Floetenmeyer M, Konhauser KO, Kappler A, Obst M Appl Environ Microbiol 10.1128/AEM.03277-13 2013 *

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