Name: Saccharothrix aerocolonigenes subsp. staurosporea AM-2282
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 136894

Type strain:

Species: Saccharothrix aerocolonigenes subsp. staurosporea

Strain Designation: AM-2282

Culture col. no.: CIP 107745, NRRL 11184, JCM 9734, ATCC 55006, CGMCC 4.1708, AS 4.1708

Strain history: CIP <- 2002, Z. Liu, Chinese Academy Sciences, Beijing, China: strain AS 4.1708 <- CGMCC <- JCM <- S. Omura: strain AM-2282

NCBI tax ID(s): 65499 (species)

SI-ID 23734

ATCC 55006, NRRL 11184, JCM 9734, AS 4.1708, CIP 107745, CGMCC 4.1708

Section

Saccharothrix aerocolonigenes subsp. staurosporea AM-2282 is an obligate aerobe, mesophilic, Gram-positive bacterium of the family Pseudonocardiaceae.

filament-shaped
Gram-positive
mesophilic
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Saccharothrix*
	Species	**Saccharothrix aerocolonigenes subsp. staurosporea**
	Full Scientific Name (LPSN)	Saccharothrix aerocolonigenes subsp. staurosporea corrig. (ex ?mura et al. 1977) Takahashi et al. 1996

Synonym

Saccharothrix aerocolonigenes subsp. staurosporeus

Information on morphological and physiological properties Morphology

[Ref.: #36632]	Gram stain	positive

[Ref.: #36632]	Cell shape	filament-shaped

[Ref.: #36632]	Motility	no

Information on culture and growth conditions Culture and growth conditions

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Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36632]

Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

CIP Medium 72

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #36632]

Culture medium

CIP Medium 275

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #36632]		growth	30 °C
[Ref.: #36632]		growth	15-37 °C
[Ref.: #36632]	no	growth	10 °C
[Ref.: #36632]	no	growth	45 °C
[Ref.: #67770]		growth	28 °C

[Ref.: #36632]	Temperature range	mesophilic
[Ref.: #36632]	Temperature range	psychrophilic
[Ref.: #36632]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #36632]

Oxygen tolerance

obligate aerobe

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #36632]	citrate ChEBI	-	carbon source
[Ref.: #36632]	esculin ChEBI	+	hydrolysis
[Ref.: #36632]	nitrate ChEBI	-	reduction
[Ref.: #36632]	nitrate ChEBI	-	respiration
[Ref.: #36632]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #36632]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #36632]		indole ChEBI	no
[Ref.: #67770]		staurosporine ChEBI	yes

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #36632]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #36632]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #36632]	caseinase	+	3.4.21.50
[Ref.: #36632]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #36632]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #36632]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #36632]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #36632]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #36632]	10618	-	+	+	+	-	+	-	+	-	+	+	-	+	+	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Iwate Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia

[Ref.: #36632]	Sample type/isolated from	Environment, Soil
[Ref.: #36632]	Geographic location (country and/or sea, region)	Iwate
[Ref.: #36632]	Country	Japan
[Ref.: #36632]	Country ISO 3 Code	JPN
[Ref.: #36632]	Continent	Asia

[Ref.: #36632]	Geographic location (country and/or sea, region)	Iwate Pref.
[Ref.: #36632]	Country	Japan
[Ref.: #36632]	Country ISO 3 Code	JPN
[Ref.: #36632]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB024287 (>99% sequence identity) for Lentzea from Microbeatlas

Aquatic Samples	22
Soil Samples	287
Animal Samples	13
Plant Samples	45
Total Samples	367

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #36632]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Saccharothrix aerocolonigenes gene for 16S ribosomal RNA	AB024287	1476	ENA	68170 tax ID

[Ref.: #67770]

GC-content

67 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #36632]

Culture collection no.

CIP 107745, NRRL 11184, JCM 9734, ATCC 55006, CGMCC 4.1708, AS 4.1708

[Ref.: #93915]

SI-ID 23734

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Lentzea flaviverrucosa sp. nov. and transfer of the type strain of Saccharothrix aerocolonigenes subsp. staurosporea to Lentzea albida.	Xie Q, Wang Y, Huang Y, Wu Y, Ba F, Liu Z	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1815	2002	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#36632 Collection of Institut Pasteur ; Curators of the CIP; CIP 107745
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#93915

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID23734.1 )

* These data were automatically processed and therefore are not curated

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