Name: Taylorella asinigenitalis UCD-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 136889

Type strain:

Species: Taylorella asinigenitalis

Strain Designation: UCD-1

Culture col. no.: CIP 107673, ATCC 700933, LMG 19572

Strain history: CIP <- 2002, ATCC <- D. Hirsh <- S.S. Jang: strain UCD-1

NCBI tax ID(s): 1408475 (strain), 84590 (species)

SI-ID 100992

ATCC 700933, LMG 19572, CIP 107673

Section

Taylorella asinigenitalis UCD-1 is a microaerophile, mesophilic bacterium of the family Alcaligenaceae.

mesophilic
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Alcaligenaceae*
	Genus	*Taylorella*
	Species	**Taylorella asinigenitalis**
	Full Scientific Name (LPSN)	Taylorella asinigenitalis Jang et al. 2001

Information on morphological and physiological properties Morphology

[Ref.: #36622]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.986

[Ref.: #36622]	Cell shape	rod-shaped

[Ref.: #36622]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %93.224

Information on culture and growth conditions Culture and growth conditions

[Ref.: #36622]

Culture medium

MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria

[Ref.: #36622]

Culture medium growth

[Ref.: #36622]

Culture medium composition

expand / minimize

[Ref.: #36622]

Culture medium

CIP Medium 10

[Ref.: #36622]

Culture medium growth

[Ref.: #36622]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #36622]		growth	37 °C
[Ref.: #36622]		growth	30-41 °C
[Ref.: #36622]	no	growth	15 °C
[Ref.: #36622]	no	growth	25 °C
[Ref.: #36622]	no	growth	45 °C

[Ref.: #36622]	Temperature range	mesophilic
[Ref.: #36622]	Temperature range	psychrophilic
[Ref.: #36622]	Temperature range	mesophilic
[Ref.: #36622]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #36622]

Oxygen tolerance

microaerophile

[Ref.: #69481]	Ability of spore formation	no Confidence in %91
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #36622]	esculin ChEBI	-	hydrolysis
[Ref.: #36622]	hippurate ChEBI	+	hydrolysis
[Ref.: #36622]	nitrate ChEBI	+	reduction
[Ref.: #36622]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #36622]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #36622]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #36622]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #36622]	beta-galactosidase	-	3.2.1.23
[Ref.: #36622]	catalase	+	1.11.1.6
[Ref.: #36622]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #36622]	lysine decarboxylase	-	4.1.1.18
[Ref.: #36622]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #36622]	oxidase	+
[Ref.: #36622]	urease	-	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #36622]	Sample type/isolated from	Urethral fossa of a jack donkey, Equus asinus
[Ref.: #36622]	Geographic location (country and/or sea, region)	California
[Ref.: #36622]	Country	United States of America
[Ref.: #36622]	Country ISO 3 Code	USA
[Ref.: #36622]	Continent	North America
[Ref.: #36622]	Isolation date	1997

[Ref.: #36622]	Geographic location (country and/or sea, region)	California
[Ref.: #36622]	Country	USA
[Ref.: #36622]	Country ISO 3 Code	USA
[Ref.: #36622]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #36622]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Taylorella asinigenitalis ATCC 700933	GCA_000687755	contig	GenBank	1408475 tax ID	*
[Ref.: #66792]	Taylorella asinigenitalis ATCC 700933	1408475.3	wgs	PATRIC	1408475 tax ID	*
[Ref.: #66792]	Taylorella asinigenitalis ATCC 700933	2556921627	draft	JGI IMG/M	1408475 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Taylorella asinigenitalis ATCC 700933 PATRIC: 1408475.3
[Ref.: #69481]	spore-forming	no	91	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Taylorella asinigenitalis ATCC 700933 PATRIC: 1408475.3
[Ref.: #69480]	motile	no	85.29	no
[Ref.: #69480]	gram-positive	no	98.753	no
[Ref.: #69480]	anaerobic	no	94.103	no
[Ref.: #69480]	halophile	no	76.554	no
[Ref.: #69480]	spore-forming	no	97.532	no
[Ref.: #69480]	glucose-util	no	79.42	no
[Ref.: #69480]	thermophile	no	97.439	yes
[Ref.: #69480]	aerobic	no	82.911	no
[Ref.: #69480]	flagellated	no	96.888	no
[Ref.: #69480]	glucose-ferment	no	88.508	no

Availability in culture collections External links

[Ref.: #36622]

Culture collection no.

CIP 107673, ATCC 700933, LMG 19572

[Ref.: #93910]

SI-ID 100992

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Pelistega indica sp. nov., isolated from human gut.	Prakash O, Munot H, Nimonkar Y, Sharma M, Kumbhare S, Shouche YS	Int J Syst Evol Microbiol	10.1099/ijs.0.059782-0	2014	*
Phylogeny	Structure of the O-polysaccharide of the lipopolysaccharide produced by Taylorella asinigenitalis type strain (ATCC 700933).	Vinogradov E, MacLean LL, Brooks BW, Lutze-Wallace C, Perry MB	Biochem Cell Biol	10.1139/o08-036	2008	*
Phylogeny	Isolation and identification of Taylorella asinigenitalis from the genital tract of a stallion, first case of a natural infection.	Baverud V, Nystrom C, Johansson KE	Vet Microbiol	10.1016/j.vetmic.2006.04.027	2006	*
Phylogeny	Taylorella asinigenitalis sp. nov., a bacterium isolated from the genital tract of male donkeys (Equus asinus).	Jang SS, Donahue JM, Arata AB, Goris J, Hansen LM, Earley DL, Vandamme PA, Timoney PJ, Hirsh DC	Int J Syst Evol Microbiol	10.1099/00207713-51-3-971	2001	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#36622 Collection of Institut Pasteur ; Curators of the CIP; CIP 107673

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#93910

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100992.1 )

* These data were automatically processed and therefore are not curated

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Taylorella asinigenitalis ATCC 700933

Taylorella asinigenitalis ATCC 700933

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