Name: Loktanella fryxellensis R-7670
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13674

Type strain:

Species: Loktanella fryxellensis

Strain Designation: R-7670

Culture col. no.: DSM 16213, LMG 22007, JCM 21635, CIP 108323, IAM 15180, NBRC 102485

Strain history: CIP <- 2004, S. Van Trappen, Ghent Univ., Ghent, Belgium <- J. Mergaert, Ghent Univ., Ghent, Belgium: strain R-7670

NCBI tax ID(s): 245187 (species)

SI-ID 21643

LMG 22007, CIP 108323, DSM 16213, NBRC 102485, IAM 15180, JCM 21635

Section

Loktanella fryxellensis R-7670 is an aerobe, psychrophilic, Gram-negative bacterium that was isolated from microbial mat.

Gram-negative
rod-shaped
aerobe
psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Loktanella*
	Species	**Loktanella fryxellensis**
	Full Scientific Name (LPSN)	Loktanella fryxellensis Van Trappen et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #30155]	Gram stain	negative
[Ref.: #119473]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.984

[Ref.: #30155]	Cell length	2.5 µm

[Ref.: #30155]	Cell width	1 µm

[Ref.: #30155]	Cell shape	rod-shaped
[Ref.: #119473]	Cell shape	rod-shaped

[Ref.: #30155]	Motility	no
[Ref.: #119473]	Motility	yes

[Ref.: #30155]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6329]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #6329]

Culture medium growth

[Ref.: #6329]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6329]

Culture medium composition

expand / minimize

[Ref.: #37381]

Culture medium

Marine agar (MA)

[Ref.: #37381]

Culture medium growth

[Ref.: #37381]

Culture medium composition

expand / minimize

[Ref.: #119473]

Culture medium

CIP Medium 13

[Ref.: #119473]

Culture medium growth

[Ref.: #119473]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #6329]		growth	20 °C
[Ref.: #30155]		growth	5.0-30 °C
[Ref.: #30155]		optimum	25 °C
[Ref.: #37381]		growth	25 °C
[Ref.: #67770]		growth	20 °C
[Ref.: #119473]		growth	5-25 °C
[Ref.: #119473]	no	growth	30 °C
[Ref.: #119473]	no	growth	37 °C
[Ref.: #119473]	no	growth	41 °C

[Ref.: #6329]	Temperature range	psychrophilic
[Ref.: #30155]	Temperature range	mesophilic
[Ref.: #37381]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	psychrophilic
[Ref.: #119473]	Temperature range	psychrophilic
[Ref.: #119473]	Temperature range	mesophilic
[Ref.: #119473]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30155]

Oxygen tolerance

aerobe

[Ref.: #30155]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.997

	Salt	Tested relation		Salt conc.
[Ref.: #30155]	NaCl		growth	0.0-5.0	%
[Ref.: #30155]	NaCl		optimum	2.5	%
[Ref.: #119473]	NaCl	no	growth	0	%
[Ref.: #119473]	NaCl	no	growth	2	%
[Ref.: #119473]	NaCl	no	growth	4	%
[Ref.: #119473]	NaCl	no	growth	6	%
[Ref.: #119473]	NaCl	no	growth	8	%
[Ref.: #119473]	NaCl	no	growth	10	%

[Ref.: #30155]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #119473]	citrate ChEBI	-	carbon source
[Ref.: #30155]	esculin ChEBI	+	hydrolysis
[Ref.: #119473]	esculin ChEBI	+	hydrolysis
[Ref.: #119473]	nitrate ChEBI	-	reduction
[Ref.: #119473]	nitrite ChEBI	-	reduction
[Ref.: #30155]	tween 80 ChEBI	+	carbon source

	Metabolite production	Metabolite	Production
[Ref.: #119473]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #119473]		acetoin ChEBI	-
[Ref.: #119473]		glucose ChEBI		+

	Enzyme	Enzyme activity	EC number
[Ref.: #30155]	acid phosphatase	+	3.1.3.2
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #119473]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #30155]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119473]	amylase	+
[Ref.: #119473]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119473]	caseinase	-	3.4.21.50
[Ref.: #30155]	catalase	+	1.11.1.6
[Ref.: #119473]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #30155]	cytochrome oxidase	+	1.9.3.1
[Ref.: #119473]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119473]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #119473]	gelatinase	+/-
[Ref.: #119473]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #119473]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119473]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #119473]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #119473]	oxidase	+
[Ref.: #119473]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #119473]	tryptophan deaminase	-
[Ref.: #119473]	tween esterase	+
[Ref.: #119473]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119473]	11088	-	+	+	+	-	+	-	-	-	-	+	+	+	+	-	+	+	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	glycogen biosynthesis	100	4 of 4
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	Entner Doudoroff pathway	100	10 of 10
[Ref.: #66794]	octane oxidation	100	3 of 3
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	pentose phosphate pathway	90.91	10 of 11
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	molybdenum cofactor biosynthesis	88.89	8 of 9
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	88.89	8 of 9
[Ref.: #66794]	glutathione metabolism	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	vitamin B12 metabolism	82.35	28 of 34
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	myo-inositol biosynthesis	80	8 of 10
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	allantoin degradation	77.78	7 of 9
[Ref.: #66794]	lipid A biosynthesis	77.78	7 of 9
[Ref.: #66794]	degradation of sugar acids	76	19 of 25
[Ref.: #66794]	pyrimidine metabolism	75.56	34 of 45
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	purine metabolism	73.4	69 of 94
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	d-xylose degradation	72.73	8 of 11
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	oxidative phosphorylation	71.43	65 of 91
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	glutamate and glutamine metabolism	71.43	20 of 28
[Ref.: #66794]	heme metabolism	71.43	10 of 14
[Ref.: #66794]	citric acid cycle	71.43	10 of 14
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	lipid metabolism	67.74	21 of 31
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	4-hydroxymandelate degradation	66.67	6 of 9
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	tryptophan metabolism	65.79	25 of 38
[Ref.: #66794]	tetrahydrofolate metabolism	64.29	9 of 14
[Ref.: #66794]	degradation of pentoses	64.29	18 of 28
[Ref.: #66794]	metabolism of disaccharids	63.64	7 of 11
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	lysine metabolism	61.9	26 of 42
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	leucine metabolism	61.54	8 of 13
[Ref.: #66794]	chlorophyll metabolism	61.11	11 of 18
[Ref.: #66794]	glycine betaine biosynthesis	60	3 of 5
[Ref.: #66794]	glycogen metabolism	60	3 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	60	3 of 5
[Ref.: #66794]	glycolysis	58.82	10 of 17
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
[Ref.: #66794]	arginine metabolism	58.33	14 of 24
[Ref.: #66794]	methionine metabolism	57.69	15 of 26
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	aspartate and asparagine metabolism	55.56	5 of 9
[Ref.: #66794]	degradation of hexoses	55.56	10 of 18
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	histidine metabolism	55.17	16 of 29
[Ref.: #66794]	phenol degradation	55	11 of 20
[Ref.: #66794]	ascorbate metabolism	54.55	12 of 22
[Ref.: #66794]	3-phenylpropionate degradation	53.33	8 of 15
[Ref.: #66794]	polyamine pathway	52.17	12 of 23
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	cysteine metabolism	50	9 of 18
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	tyrosine metabolism	50	7 of 14
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	urea cycle	46.15	6 of 13
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	factor 420 biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	gallate degradation	40	2 of 5
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	carotenoid biosynthesis	36.36	8 of 22
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	nitrate assimilation	33.33	3 of 9
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	30.77	4 of 13
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	daunorubicin biosynthesis	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6329]	Sample type/isolated from	microbial mat
[Ref.: #6329]	Geographic location (country and/or sea, region)	Lake Fryxell, Dry Valleys
[Ref.: #6329]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Microbial mat from Lake Fryxell
[Ref.: #67770]	Geographic location (country and/or sea, region)	McMurdo Dry Valleys
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica

[Ref.: #119473]	Sample type/isolated from	Microbial material
[Ref.: #119473]	Geographic location (country and/or sea, region)	Fryxell lake, McMurdo dry valleys
[Ref.: #119473]	Country	Antarctica
[Ref.: #119473]	Country ISO 3 Code	ATA
[Ref.: #119473]	Continent	Antarctica
[Ref.: #119473]	Isolation date	1999
* marker position based on {}

Isolation sources categories

#Environmental

#Microbial community

#Microbial mat

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ582225 (>99% sequence identity) for Loktanella fryxellensis from Microbeatlas

Aquatic Samples	1203
Soil Samples	170
Animal Samples	76
Plant Samples	32
Total Samples	1481

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6329]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119473]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Loktanella fryxellensis 16S rRNA gene, type strain LMG 22007T	AJ582225	1415	ENA	245187 tax ID
[Ref.: #20218]	Loktanella fryxellensis strain LMG22007 16S ribosomal RNA gene, partial sequence	DQ915608	1306	ENA	245187 tax ID	*
[Ref.: #20218]	Loktanella fryxellensis gene for 16S rRNA, partial sequence, strain: NBRC 102485	AB681824	1388	ENA	245187 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Loktanella fryxellensis DSM 16213	GCA_900110065	scaffold	GenBank	245187 tax ID
[Ref.: #66792]	Loktanella fryxellensis strain DSM 16213	245187.6	wgs	PATRIC	245187 tax ID	*
[Ref.: #66792]	Loktanella fryxellensis DSM 16213	2622736532	draft	JGI IMG/M	245187 tax ID	*

[Ref.: #30155]	GC-content	66.05 mol%
[Ref.: #67770]	GC-content	65.7 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Loktanella fryxellensis DSM 16213 NCBI: GCA_900110065.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Loktanella fryxellensis strain DSM 16213 PATRIC: 245187.6
[Ref.: #69480]	motile	no	62.374	yes
[Ref.: #69480]	gram-positive	no	98.316	yes
[Ref.: #69480]	anaerobic	no	97.833	yes
[Ref.: #69480]	aerobic	yes	89.88	yes
[Ref.: #69480]	halophile	no	61.923	no
[Ref.: #69480]	spore-forming	no	95.859	yes
[Ref.: #69480]	glucose-util	yes	92.383	no
[Ref.: #69480]	thermophile	no	98.499	yes
[Ref.: #69480]	flagellated	no	89.243	yes
[Ref.: #69480]	glucose-ferment	no	88.306	no

Availability in culture collections External links

[Ref.: #6329]

Culture collection no.

DSM 16213, LMG 22007, JCM 21635, CIP 108323, IAM 15180, NBRC 102485

[Ref.: #82857]

SI-ID 21643

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Loktanella salsilacus gen. nov., sp. nov., Loktanella fryxellensis sp. nov. and Loktanella vestfoldensis sp. nov., new members of the Rhodobacter group, isolated from microbial mats in Antarctic lakes.	Van Trappen S, Mergaert J, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.03006-0	2004	*

References

#6329

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16213

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30155

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26506 (see below)

#37381 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#82857

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID21643.1 )

#119473 Collection of Institut Pasteur ; Curators of the CIP; CIP 108323

#26506

IJSEM 1263 2004 ( DOI 10.1099/ijs.0.03006-0 , PubMed 15280301 )

* These data were automatically processed and therefore are not curated

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Search for species Loktanella fryxellensis in external resources:
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Loktanella fryxellensis DSM 16213

Loktanella fryxellensis strain DSM 16213

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