Name: Psychrobacter oceani 4k5
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 136000

Type strain:

Species: Psychrobacter oceani

Strain Designation: 4k5

Culture col. no.: CIP 110944, JCM 30235, NCIMB 14948

Strain history: CIP <- 2015, JCM <- 2014, H. Matsuyama, Tokai Univ., Japan: strain 4k5

NCBI tax ID(s): 1462563 (species)

SI-ID 412649

CIP 110944

Section

Psychrobacter oceani 4k5 is a mesophilic, Gram-negative, oval-shaped bacterium of the family Moraxellaceae.

Gram-negative
oval-shaped
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Psychrobacter*
	Species	**Psychrobacter oceani**
	Full Scientific Name (LPSN)	Psychrobacter oceani Matsuyama et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #35295]	Gram stain	negative

[Ref.: #35295]	Cell shape	oval-shaped

[Ref.: #35295]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #35295]

Culture medium

Marine agar (MA)

[Ref.: #35295]

Culture medium growth

[Ref.: #35295]

Culture medium composition

expand / minimize

[Ref.: #35295]

Culture medium

CIP Medium 13

[Ref.: #35295]

Culture medium growth

[Ref.: #35295]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #35295]			growth	25 °C
[Ref.: #67770]			growth	25 °C

[Ref.: #35295]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sediment of the Pacific Ocean

[Ref.: #35295]	Sample type/isolated from	Environment, Sediment sample
[Ref.: #35295]	Country	Pacific Ocean

[Ref.: #35295]	Geographic location (country and/or sea, region)	Pacific Ocean
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB910522 (>99% sequence identity) for Psychrobacter pacificensis subclade from Microbeatlas

Aquatic Samples	2631
Soil Samples	90
Animal Samples	395
Plant Samples	6
Total Samples	3122

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #35295]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Psychrobacter oceani gene for 16S ribosomal RNA, partial sequence	AB910522	1465	ENA	1462563 tax ID

[Ref.: #67770]

GC-content

45.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #35295]

Culture collection no.

CIP 110944, JCM 30235, NCIMB 14948

[Ref.: #93255]

SI-ID 412649

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Psychrobacter oceani sp. nov., isolated from marine sediment.	Matsuyama H, Minami H, Sakaki T, Kasahara H, Watanabe A, Onoda T, Hirota K, Yumoto I	Int J Syst Evol Microbiol	10.1099/ijs.0.000118	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#35295 Collection of Institut Pasteur ; Curators of the CIP; CIP 110944
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#93255

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID412649.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Psychrobacter oceani in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF